Query= MSMg01no311_j13.b1 MSMg01no311_j13.b1 CHROMAT_FILE:
MSMg01no311_j13.b1 PHD_FILE: MSMg01no311_j13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:52:29 2005
(293 letters)
>mm_chr8_118061567_118062258
Length = 692
Score = 482 bits (249), Expect = e-140
Identities = 267/273 (97%), Gaps = 1/273 (0%)
Strand = Plus / Plus
Query: 5 gaattccactgacataaaccttttatagaaacaatcaaatatcacttggtaaaataatta 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccactgacataaaccttttatagaaacaatcaaatatcacttggtaaaataatta 264
Query: 65 gcataagaatagcacagtcagtctgcccgatgcttggtgccaaacatcaagagggtttgt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gcataagaatagcacagtcagtctgcccgatgcttggtgccaaacatcaagagggtttgt 324
Query: 125 tccagcccccatctctctgcctcgttcaggggaagaaagcacatttttttccccctctct 184
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 325 gccagcccccatctctctgcctcgttcaggggaagaaagcacatttttt-ccccctctct 383
Query: 185 cagcttggtaccaagaccaaggcaaaggcctatagcacaatcttgggacattttgttatt 244
|||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 cagcttggtatcaagcccaaggcaaaggcctatagcacaatcttgggacattttgttatt 443
Query: 245 ctagggggtgagtaaggatgcaggtgacccttc 277
|||| ||||||||||||| ||||||||||||||
Sbjct: 444 ctagcgggtgagtaaggaggcaggtgacccttc 476
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 293
Length of database: 692
Length adjustment: 9
Effective length of query: 284
Effective length of database: 683
Effective search space: 193972
Effective search space used: 193972
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no311_j13.g1 MSMg01no311_j13.g1 CHROMAT_FILE:
MSMg01no311_j13.g1 PHD_FILE: MSMg01no311_j13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:52:29 2005
(245 letters)
>mm_chr8_118239675_118240319
Length = 645
Score = 458 bits (237), Expect = e-133
Identities = 243/245 (99%)
Strand = Plus / Minus
Query: 1 atccgcagtagtgcatgtttgttaggaagacaaatagatttctgagactcgctggccagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 atccgcagtagtgcatgtttgttaggaagacaaatagatttctgagactcgctggccagt 489
Query: 61 cagcttagcccacttggcaagttccaagccagtgataaaccctacaggcaattagtgggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 cagcttagcccacttggcaagttccaagccagtgataaaccctacaggcaattagtgggg 429
Query: 121 ctgagagagattgggttcatcttctccaggtatgtgtcccggttcggttttccagtccca 180
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 ctgagagagattggattcatcttctccaggtatgtgtcccggttcggttttccagtccca 369
Query: 181 tgcatgcagtgagtcctaaatacatataccatatatataggaacaagaacatgtaggaac 240
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 368 tgcatgcagtgagtcctaaatacatataccatatatataggaacaagaacatataggaac 309
Query: 241 tcgtg 245
|||||
Sbjct: 308 tcgtg 304
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 645
Length adjustment: 9
Effective length of query: 236
Effective length of database: 636
Effective search space: 150096
Effective search space used: 150096
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
