Query= MSMg01no313_l09.b1 MSMg01no313_l09.b1 CHROMAT_FILE:
MSMg01no313_l09.b1 PHD_FILE: MSMg01no313_l09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:55:43 2005
(413 letters)
>mm_chr8_122790016_122790826
Length = 811
Score = 669 bits (346), Expect = 0.0
Identities = 395/412 (95%), Gaps = 4/412 (0%)
Strand = Plus / Minus
Query: 1 ggagctggggtaaagagacagctgctattgatcatctcatcgtatttaggagctgtggca 60
|||||||||||||||||||||||||||||||| | |||||||||||||||| ||||||||
Sbjct: 487 ggagctggggtaaagagacagctgctattgataacctcatcgtatttaggaactgtggca 428
Query: 61 aaagagacagtaaggcaaaccaaggctggcctccctggactgtaaccaagtgctgcttgg 120
||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 427 aaagagacagtaaggcaaaccaaggctggcctccctggactgtaagcgagtgctgcttgg 368
Query: 121 g-tgtgagagctgagctgggcagacagagaggcactgggcttgggagccattgcctggtt 179
| | ||||||| ||||||||||||| |||||||||||||||| |||||||||||||| |
Sbjct: 367 gct-tgagagccgagctgggcagac--agaggcactgggcttgagagccattgcctggct 311
Query: 180 catcctgggaaagaggaaagggggtgccatggcttaccatgttcacgatgtatgtgtacg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 catcctgggaaagaggaaagggggtgccatggcttaccatgttcacgatgtatgtgtacg 251
Query: 240 agacgcatgtctctttgtgagctggaaatccctggctttacatgtgagaggtgtatgtgc 299
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 agacacatgtctctttgtgagctggaaatccctggctttacatgtgagaggtgtatgtgc 191
Query: 300 atgcatgttggtgtgtgcaagtgtagaatggaggtgtgcgtgagaagcaggtctggtgtg 359
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 190 atgcatgttggtgtgtgcaagtggagaatggaggtgtgcgtgagaagcaggtctggtgtg 131
Query: 360 tgtggaggtgagtagtgtatgcatatgaagggtgtatgtgtgtgtatgtgag 411
||||||||||||||||| | ||||||||||||||||||||| ||||||||||
Sbjct: 130 tgtggaggtgagtagtgcaggcatatgaagggtgtatgtgtatgtatgtgag 79
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 413
Length of database: 811
Length adjustment: 9
Effective length of query: 404
Effective length of database: 802
Effective search space: 324008
Effective search space used: 324008
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no313_l09.g1 MSMg01no313_l09.g1 CHROMAT_FILE:
MSMg01no313_l09.g1 PHD_FILE: MSMg01no313_l09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:55:44 2005
(323 letters)
>mm_chr8_122731485_122732208
Length = 724
Score = 565 bits (292), Expect = e-165
Identities = 316/324 (97%), Gaps = 2/324 (0%)
Strand = Plus / Plus
Query: 1 cataccatcctatcagccagggtcccagactgagtaaaaagaagcaagcaagttgagccc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 202 cataccatcctatcagccagggtcccagactgagtaaaaagaagcaagcaagctgagccc 261
Query: 61 cagcagtctcctctctctgcctcctgacacctatgtgtgaccccccccccacttctgcca 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 262 cagcagtctcctctctctgcctcctgacacctatgtgtgaccccccccc-acttctgcca 320
Query: 121 ccatcccttcctaccattagtccttcatccccagaagtccctaacccagtgt-ggaggat 179
||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 321 ccatcccttcctaccattagtccttcatccccagaagtcgctaacccagtgccggaggat 380
Query: 180 gagagtcccgggccagggaaggcactgggccgtgggttcggcgaccagcaaaggcagagt 239
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 381 gagagtcccgggccagggaaggcactgggccatgggttcggcgaccagcaaaggcagagt 440
Query: 240 gggcactcctctggtattctgtgcctttcttacttcccctgcatcctagatccacgtaca 299
||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gggcagtcctctggttttctgtgcctttcttacttcccctgcatcctagatccacgtaca 500
Query: 300 cccgccttcagctcacagggggcg 323
||||||||||||||||||||||||
Sbjct: 501 cccgccttcagctcacagggggcg 524
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 724
Length adjustment: 9
Effective length of query: 314
Effective length of database: 715
Effective search space: 224510
Effective search space used: 224510
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
