Query= MSMg01no313_p10.b1 MSMg01no313_p10.b1 CHROMAT_FILE:
MSMg01no313_p10.b1 PHD_FILE: MSMg01no313_p10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:56:16 2005
(407 letters)
>mm_chr8_113734402_113735208
Length = 807
Score = 714 bits (369), Expect = 0.0
Identities = 394/405 (97%), Gaps = 6/405 (1%)
Strand = Plus / Minus
Query: 5 gaattcatcatttaaccgccaaattaaaccattttatattttaaagagcctcagtgggtg 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 773 gaattcatcatttaactgccaaattaaaccattttatattttaaagagcctcagtgggtg 714
Query: 65 aaattacttgtcatgtccc---cctgacagttgacatccctggaactcatcatggaaaga 121
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 713 aaattacttgtcatg---caagcctgacagttgacatccctggaactcatcatggaaaga 657
Query: 122 gagaacctgctcctgaaagttgtcctctgtctttcacacctgcactgtggagtccgtgtg 181
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 656 gagaacctgctcctgaaagttgtcctctgtcttccacacctgcactgtggagtccgtgtg 597
Query: 182 cctgtgctcacaaataatatacctacacatcctcatcgtcgtcatcgtcatcaccaataa 241
|||||||||||||||||||||||||||||| || |||||||||||||||||||||||||
Sbjct: 596 cctgtgctcacaaataatatacctacacattcttgtcgtcgtcatcgtcatcaccaataa 537
Query: 242 aattttaaaattaagatcctagaatactaaatttgtgtattatacctgactaccctacca 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 aattttaaaattaagatcctagaatactaaatttgtgtattatacctgactaccctacca 477
Query: 302 agccatcttttgggggagtggcatcacactgaaagctcaccttaagtctctcattatcat 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 agccatcttttgggggagtggcatcacactgaaagctcaccttaagtctctcattatcat 417
Query: 362 tcatcgtcattctttatagcctagtttgccacttagcaagagtat 406
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 tcatcgtcattctttatagcctagtttgccacttagcaagagtat 372
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 407
Length of database: 807
Length adjustment: 9
Effective length of query: 398
Effective length of database: 798
Effective search space: 317604
Effective search space used: 317604
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no313_p10.g1 MSMg01no313_p10.g1 CHROMAT_FILE:
MSMg01no313_p10.g1 PHD_FILE: MSMg01no313_p10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:56:16 2005
(367 letters)
>mm_chr8_113582971_113583737
Length = 767
Score = 590 bits (305), Expect = e-173
Identities = 343/361 (95%), Gaps = 11/361 (3%)
Strand = Plus / Plus
Query: 1 actgataatggaggaagttacaggagggcagagaaaatttaaggccctttaccgctacac 60
|||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 201 actgataacggaggaagttacaggagggcagagaaaatttaaggccctttactgctacac 260
Query: 61 aaagggccattacatttagattgtctcaccctagaaacattagcatgccacagccctggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaagggccattacatttagattgtctcaccctagaaacattagcatgccacagccctggg 320
Query: 121 gaggcaaccaatgggatgaggccagaaaggagaagaaagccaatgtt-----gtgttttg 175
|||||||||||||||||||||||||||||| |||||||||||||||| ||||||||
Sbjct: 321 gaggcaaccaatgggatgaggccagaaaggggaagaaagccaatgttttgttgtgttttg 380
Query: 176 gggacagggtttctctgtgtagccctggctgtcctggaactcactctgtagaccaggctg 235
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 381 gggacagggtttctctgtgtagccctggctgtcctggaactc----tgtagaccaggctg 436
Query: 236 gcctggaattcagagatcacctgcttctacctcccaagggttgggattaaaggtatgcgc 295
|||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| ||
Sbjct: 437 gcctggaattcagagatcacctgcttctacctcccaagggttggaattaaacgtatgtgc 496
Query: 296 caccacctcctggttcaggaaatcaaaatttatcaagcttaaagagggagggg--tgggg 353
|||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 497 caccacctcctggttcaggaaatcaaaatttaacaagcttaaagagggaggggggtgggg 556
Query: 354 g 354
|
Sbjct: 557 g 557
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 367
Length of database: 767
Length adjustment: 9
Effective length of query: 358
Effective length of database: 758
Effective search space: 271364
Effective search space used: 271364
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
