Query= MSMg01no315_c21.b1 MSMg01no315_c21.b1 CHROMAT_FILE:
MSMg01no315_c21.b1 PHD_FILE: MSMg01no315_c21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:56:34 2005
(371 letters)
>mm_chr8_10130486_10131256
Length = 771
Score = 681 bits (352), Expect = 0.0
Identities = 364/368 (98%)
Strand = Plus / Plus
Query: 2 ggaattcactgagttctccctcgaatggggaaggagctctggggagggtgttccttttgg 61
|||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ggaattcactgagttcacagtcgaatggggaaggagctctggggagggtgttccttttgg 261
Query: 62 catttgagcagagaacacccatgaacctgttaaaaatatgaaccccaagaaataaggtag 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 catttgagcagagaacacccatgaacctgttaaaaatatgaaccccaagaaataaggtag 321
Query: 122 aaaagcaaacaaaaacaacaaacaaacgtctctgaatatgagtgttaatacttttgtaaa 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 aaaagcaaacaaaaacaacaaacaaacgtctctgaatatgagtgttaatacttttgtaaa 381
Query: 182 tctgccaagattcccagtacaaccgtcccggatttgatattcagaaaagcagggcagaat 241
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tctgccaagattctcagtacaaccgtcccggatttgatattcagaaaagcagggcagaat 441
Query: 242 tgctgacacggactctgcatagacagccattcacggagtgaatgccgcagctctcctgcc 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 tgctgacacggactctgcatagacagccattcacggagtgaatgccgcagctctcctgcc 501
Query: 302 gctgttctccctggatgactaatatatcaagcatggtatttgttttgtgctctgaagaac 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 gctgttctccctggatgactaatatatcaagcatggtatttgttttgtgctctgaagaac 561
Query: 362 ttgctcca 369
||||||||
Sbjct: 562 ttgctcca 569
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 771
Length adjustment: 9
Effective length of query: 362
Effective length of database: 762
Effective search space: 275844
Effective search space used: 275844
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no315_c21.g1 MSMg01no315_c21.g1 CHROMAT_FILE:
MSMg01no315_c21.g1 PHD_FILE: MSMg01no315_c21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:56:34 2005
(643 letters)
>mm_chr8_10203745_10204786
Length = 1042
Score = 1050 bits (543), Expect = 0.0
Identities = 618/643 (96%), Gaps = 1/643 (0%)
Strand = Plus / Minus
Query: 1 atgtcaacatctttgcccatgtgtctctctatgacatcatgataagaagaggcattcaga 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||
Sbjct: 842 atgtcaacatctttgcccatgtatctctctatgacatcatgataagaagaggcattcgga 783
Query: 61 tatgaccacatgattttctctgacaactacagacagagaaaataagaggccctggaagtt 120
||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 tatgatcacatgattttctgtgacaactacagacagagaaaataagaggccctggaagtt 723
Query: 121 tctgcttatatgtggaagcttctaccccatccacataaacagtgactcatgttgtgtctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 722 tctgcttatatgtggaagcttctaccccatccacataaacagtgactcatgctgtgtctg 663
Query: 181 cttcctaagccagcatcgacagagtgatgatatatggggctgaacctggcccagctcatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 cttcctaagccagcatcgacagagtgatgatatatggggctgaacctggcccagctcatc 603
Query: 241 tgtaatgtatctcaaaggtcatcaagtgagaggcaaggcatgagtggtggtcagacagga 300
||||||||| |||||||| ||||||||||||||||||||||||||||||||||||| |||
Sbjct: 602 tgtaatgtagctcaaaggccatcaagtgagaggcaaggcatgagtggtggtcagacggga 543
Query: 301 gggctgtgtgcctatctcatggtactacagtaaaggctaggacccacacttatataaaca 360
|||||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 542 gggctgtgtgcctatctcatggtactacagtaaaggctaggaataaaacttatataaaca 483
Query: 361 tccctcttggaacttagcagtactgccagacacaacttcagattagatttttttaaagtg 420
||||||| ||||||||||||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 482 tccctctcggaacttagcagtactgccagacacaacttcagattaga-ttttttcaagta 424
Query: 421 tgccattaaagtaggtagaggttttgagagtcaaaaattgaggggctcaactggaatctc 480
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 423 tgccattaaagtaggtagaggttttgagagtcaaatattgaggggctcaactggaatctc 364
Query: 481 agtagtcttgggtactctgttgtggaaaaaatagaagttggcgtggggagagagcaggct 540
|||||||||||||||||||| ||||| ||||||||||| || ||||||||||||||||||
Sbjct: 363 agtagtcttgggtactctgtcgtggagaaaatagaagtgggggtggggagagagcaggct 304
Query: 541 atagagaatattgtgaacagttgtccatgcagaataacacagtggacacattactagtga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 atagagaatattgtgaacagttgtccatgcagaataacacagtggacacattactagtga 244
Query: 601 tctaccacagcatgcttgagaaggacaagctacaggaaacagt 643
|||||||||||||||||||||| ||||||||| ||| |||||
Sbjct: 243 tctaccacagcatgcttgagaaaaacaagctactggagacagt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1042
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1032
Effective search space: 653256
Effective search space used: 653256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
