Query= MSMg01no317_b14.b1 MSMg01no317_b14.b1 CHROMAT_FILE:
MSMg01no317_b14.b1 PHD_FILE: MSMg01no317_b14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:02 2005
(317 letters)
>mm_chr8_124646212_124646928
Length = 717
Score = 507 bits (262), Expect = e-148
Identities = 298/310 (96%)
Strand = Plus / Minus
Query: 6 ggaattctggagtttccctgaatactgtgggcgaggattgggaaggaggaggcacgcagc 65
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggaattctggagagacactgaatactgtgggcgaggattgggaaggaggaggcacgcagc 262
Query: 66 agaaagcaggaacgcaggagcactctggtttggttttgtttgggatttttgttccctttt 125
||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agagagcaggaaggcaggagcactctggtttggttttgtttgggatttttgttccctttt 202
Query: 126 cttgagacagagtcttcttatgtagccaaggctgtcctccacctcccgagcctgggatga 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttgagacagagtcttcttatgtagccaaggctgtcctccacctcccgagcctgggatga 142
Query: 186 caggtgtgtagacgcagacagtggaattgaactttcaactccagcaggataaactttcta 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 caggtgtgtagacgcagacagtggaattgaactttcaactccagcaggataaactttcta 82
Query: 246 acctatggtactgggtcaacctgcttggtctcttagtggaagatgaaatgtgagccacgc 305
|| |||||| |||||||||||||||||| | |||||||||||||||||||||||| | ||
Sbjct: 81 acatatggtcctgggtcaacctgcttggccacttagtggaagatgaaatgtgagctatgc 22
Query: 306 ctcctgccat 315
||||||||||
Sbjct: 21 ctcctgccat 12
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no317_b14.g1 MSMg01no317_b14.g1 CHROMAT_FILE:
MSMg01no317_b14.g1 PHD_FILE: MSMg01no317_b14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:02 2005
(283 letters)
>mm_chr8_124488036_124488718
Length = 683
Score = 526 bits (272), Expect = e-154
Identities = 281/284 (98%), Gaps = 2/284 (0%)
Strand = Plus / Plus
Query: 1 caactgttggagtcaaaagtgtccaccggtcgtttgtctgtatccttatttttttgaaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caactgttggagtcaaaagtgtccaccggtcgtttgtctgtatccttatttttttgaaac 260
Query: 61 tgtggtcttggcatcccagctctggtggatctttaagtctccagagcagagcagtgccct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtggtcttggcatcccagctctggtggatctttaagtctccagagcagagcagtgccct 320
Query: 121 ggggacactgtggaacttttgggacgagagtacattctttccactcctgcagtgtttctg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggggacactgtggaacttttgggacgagagtacattctttccactcctgcagtgtttctg 380
Query: 181 agagtacctttttgcatacacggtgtcctgactaaatctgttcctcacttgtttcacta- 239
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agagtacctttttgcatacacggtgtcctgactaaatctgttcctcacttgtttcactaa 440
Query: 240 gggtttgctcctggccttttagcttttgccaacagtgaagcata 283
||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gggct-gctcctggccttttagcttttgccaacagtgaagcata 483
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 683
Length adjustment: 9
Effective length of query: 274
Effective length of database: 674
Effective search space: 184676
Effective search space used: 184676
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
