Query= MSMg01no317_i09.b1 MSMg01no317_i09.b1 CHROMAT_FILE:
MSMg01no317_i09.b1 PHD_FILE: MSMg01no317_i09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:32 2005
(234 letters)
>mm_chr8_117444030_117444668
Length = 639
Score = 427 bits (221), Expect = e-124
Identities = 231/237 (97%), Gaps = 5/237 (2%)
Strand = Plus / Minus
Query: 1 tagggagactccttaagactagactgtgaagccagatgtggtggcccacacctttaattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tagggagactccttaagactagactgtgaagccagatgtggtggcccacacctttaattc 378
Query: 61 cagatagaggccatgggtctctctgaattccagactagcaaaggctatataggaagagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 cagatagaggccatgggtctctctgaattccagactagcaaaggctatataggaagagac 318
Query: 121 tctctacaaaaaaaaaa-----aaaaagactggcctatgaagattccacaagtcaaaggg 175
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 317 tctctacaaaaaaaaaaaaaacaaaaagactggcctatgaagattccacaagtcaaaggg 258
Query: 176 acgaagatcatatattatcttgactaaattcagtcaaggatggtctgtctgtctgcg 232
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 257 acgaagatcatatattagcttgactaaattcagtcaaggatggtctgtctgtctgcg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 639
Length adjustment: 9
Effective length of query: 225
Effective length of database: 630
Effective search space: 141750
Effective search space used: 141750
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no317_i09.g1 MSMg01no317_i09.g1 CHROMAT_FILE:
MSMg01no317_i09.g1 PHD_FILE: MSMg01no317_i09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:59:33 2005
(218 letters)
>mm_chr8_117260893_117261510
Length = 618
Score = 381 bits (197), Expect = e-110
Identities = 212/217 (97%)
Strand = Plus / Plus
Query: 1 actgctgtgctcaacagtctcagctgctcaggacttaagaggactatcccacacaaactc 60
||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 actgctgtgctcaacagtcccagctgctcaggacttaagaggactatgtcacacaaactc 260
Query: 61 attggagaatatcttgtgtggcaaagtgagacccctagctccatgggagcgggggtagga 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 261 attggagaatatcttgtgtggcaaagtgagacacctagctccatgggagcgggggtagga 320
Query: 121 gatggagaggacgagagatgataataggagagagaagagaagggagggattgagacttca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gatggagaggacgagagatgataataggagagagaagagaagggagggattgagacttca 380
Query: 181 acccatcccagcttctaagatagaaagaacactctgg 217
|||||||||||||||||||| ||||||||||||||||
Sbjct: 381 acccatcccagcttctaagaaagaaagaacactctgg 417
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 218
Length of database: 618
Length adjustment: 9
Effective length of query: 209
Effective length of database: 609
Effective search space: 127281
Effective search space used: 127281
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
