TATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCACGGAATTCCCAAGGGGGAAAGGTCCACAAGTTTTGCAGAGTATAA
CTATTAATTTTGTATGGCTAATCTTTTTAAGGAATTAAATACTCATTTCC
TTTATTTTATCTGTATGAATGTTTTGCTCTAATGCATGAATGTGTCCTAC
TTGCATGCTTTGTGCGCTTGGAGGTCAGAAGAAGGTGTTGGATCCCATGA
AACTTGGGTTATAGAGTTGTGAGCTACCATGTGAATGCTGGGAATCAAAT
CTGCGTCCTCTGAAAGAGCAACAAGTACCCTTAACAGCCAAGCCATATCA
CTAGCATCTGTAAAAGTCAATTTTCAAAAACCAACCAACCAACCAGCCAG
CCAGCCAACCAACCAACCAACCAACCAGCCAACCAACCAACCAGCCAACC
AACCAACCAGCCAACCAAAGAAACAAACAAACAGAAATACAGACAAACAT
ATAATCTAGGAAGCATATACTTGGTATTTTTCCAAAATAACTGATGCCTT
ATTTAAAACAAAACAAAACAGAATTTTAAAAAAAAGAAAAACCACTTCAC
AATGAGTATGTTTGGCACTTTTACCAATGATTTCCTAAACCTCAACCCAT
CAAATTTTCTTTCAATAGGTGAATATTCTTAACAAAGGAATATTATTCAG
CACAAAAATGAAATGACTTATCATCCATAAAAATTCACA

AATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXATTCTTGTTGTTTAGAATTTCTCTAA
ATATGCCTCCAGTATGTGTGGGGAGATAGGGGAGAGATCAATAAAGAGAA
TGTGAGCTTTTCTCACAAGTAGGTTCCATTCAGCTGAATGACATTCAAAC
CAATGCAGGTGTCCCATGTACCTTCCTTTCTGCATCCAGCTTGCTACCCT
CTGTCTGGGTGGCCAGGCAGAATGAAGGATGAATAAATTAATTATGTAAT
GAACAAAAATGAAAGCAATTTTTTAAAAAATGAAACAGCGAATAAAATCT
GAATAAAAGAAAAAAGAATTGTAACAGAATATTGAAGCTAGTATTCCTTA
GAACATCGGTCCTGTGACTTTTCCAGGAGGAACAGAGTACTTTATTGGAA
TAACAAGATTTTCTCCAGTCCTTTGACAGGAGGCTTGCTACTAGCCCAAT
GCTGGGACGGAATAACAAGCTGAGCTGATTTTATTCCAAGCTCCTCAAAA
CAAAGATGATGTGTGATGCAATCAGCCCTCCTTCCCTAACTTCCAGAGCA
AGGCACTTGATTTCAGACCACCTCCAAATGTTTATTTGCAAGTGTAAAGT
GAACTTCTACCAGGTACACACAGGATGGCAAGGGTGCCTTCTGTCACACT
GCAGCGTGCAGCCCAAGAGAGAATGTCAGCTGGTAAC

Query= MSMg01no321_k02.b1 MSMg01no321_k02.b1 CHROMAT_FILE:
MSMg01no321_k02.b1 PHD_FILE: MSMg01no321_k02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:04:25 2005
         (671 letters)



>mm_chr8_37933408_37934478
          Length = 1071

 Score = 1282 bits (663), Expect = 0.0
 Identities = 669/671 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ggggaaaggtccacaagttttgcagagtataactattaattttgtatggctaatcttttt 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 201 ggggaaaggtccacaagttttgcagagtataactattaattttgtatggctaatattttt 260

                                                                       
Query: 61  aaggaattaaatactcatttcctttattttatctgtatgaatgttttgctctaatgcatg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaggaattaaatactcatttcctttattttatctgtatgaatgttttgctctaatgcatg 320

                                                                       
Query: 121 aatgtgtcctacttgcatgctttgtgcgcttggaggtcagaagaaggtgttggatcccat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatgtgtcctacttgcatgctttgtgcgcttggaggtcagaagaaggtgttggatcccat 380

                                                                       
Query: 181 gaaacttgggttatagagttgtgagctaccatgtgaatgctgggaatcaaatctgcgtcc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaaacttgggttatagagttgtgagctaccatgtgaatgctgggaatcaaatctgcgtcc 440

                                                                       
Query: 241 tctgaaagagcaacaagtacccttaacagccaagccatatcactagcatctgtaaaagtc 300
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 441 tctgaaagagcaacaagtacccttaacagccaagccatatcactagcatctgtaaaagcc 500

                                                                       
Query: 301 aattttcaaaaaccaaccaaccaaccagccagccagccaaccaaccaaccaaccaaccag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aattttcaaaaaccaaccaaccaaccagccagccagccaaccaaccaaccaaccaaccag 560

                                                                       
Query: 361 ccaaccaaccaaccagccaaccaaccaaccagccaaccaaagaaacaaacaaacagaaat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccaaccaaccaaccagccaaccaaccaaccagccaaccaaagaaacaaacaaacagaaat 620

                                                                       
Query: 421 acagacaaacatataatctaggaagcatatacttggtatttttccaaaataactgatgcc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acagacaaacatataatctaggaagcatatacttggtatttttccaaaataactgatgcc 680

                                                                       
Query: 481 ttatttaaaacaaaacaaaacagaattttaaaaaaaagaaaaaccacttcacaatgagta 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttatttaaaacaaaacaaaacagaattttaaaaaaaagaaaaaccacttcacaatgagta 740

                                                                       
Query: 541 tgtttggcacttttaccaatgatttcctaaacctcaacccatcaaattttctttcaatag 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tgtttggcacttttaccaatgatttcctaaacctcaacccatcaaattttctttcaatag 800

                                                                       
Query: 601 gtgaatattcttaacaaaggaatattattcagcacaaaaatgaaatgacttatcatccat 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gtgaatattcttaacaaaggaatattattcagcacaaaaatgaaatgacttatcatccat 860

                      
Query: 661 aaaaattcaca 671
           |||||||||||
Sbjct: 861 aaaaattcaca 871


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 58
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 671
Length of database: 1071
Length adjustment: 10
Effective length of query: 661
Effective length of database: 1061
Effective search space:   701321
Effective search space used:   701321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no321_k02.g1 MSMg01no321_k02.g1 CHROMAT_FILE:
MSMg01no321_k02.g1 PHD_FILE: MSMg01no321_k02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:04:25 2005
         (663 letters)



>mm_chr8_38092204_38093266
          Length = 1063

 Score = 1282 bits (663), Expect = 0.0
 Identities = 663/663 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   attcttgttgtttagaatttctctaaatatgcctccagtatgtgtggggagataggggag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 863 attcttgttgtttagaatttctctaaatatgcctccagtatgtgtggggagataggggag 804

                                                                       
Query: 61  agatcaataaagagaatgtgagcttttctcacaagtaggttccattcagctgaatgacat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 agatcaataaagagaatgtgagcttttctcacaagtaggttccattcagctgaatgacat 744

                                                                       
Query: 121 tcaaaccaatgcaggtgtcccatgtaccttcctttctgcatccagcttgctaccctctgt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 tcaaaccaatgcaggtgtcccatgtaccttcctttctgcatccagcttgctaccctctgt 684

                                                                       
Query: 181 ctgggtggccaggcagaatgaaggatgaataaattaattatgtaatgaacaaaaatgaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 ctgggtggccaggcagaatgaaggatgaataaattaattatgtaatgaacaaaaatgaaa 624

                                                                       
Query: 241 gcaattttttaaaaaatgaaacagcgaataaaatctgaataaaagaaaaaagaattgtaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 gcaattttttaaaaaatgaaacagcgaataaaatctgaataaaagaaaaaagaattgtaa 564

                                                                       
Query: 301 cagaatattgaagctagtattccttagaacatcggtcctgtgacttttccaggaggaaca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 cagaatattgaagctagtattccttagaacatcggtcctgtgacttttccaggaggaaca 504

                                                                       
Query: 361 gagtactttattggaataacaagattttctccagtcctttgacaggaggcttgctactag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 gagtactttattggaataacaagattttctccagtcctttgacaggaggcttgctactag 444

                                                                       
Query: 421 cccaatgctgggacggaataacaagctgagctgattttattccaagctcctcaaaacaaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 cccaatgctgggacggaataacaagctgagctgattttattccaagctcctcaaaacaaa 384

                                                                       
Query: 481 gatgatgtgtgatgcaatcagccctccttccctaacttccagagcaaggcacttgatttc 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gatgatgtgtgatgcaatcagccctccttccctaacttccagagcaaggcacttgatttc 324

                                                                       
Query: 541 agaccacctccaaatgtttatttgcaagtgtaaagtgaacttctaccaggtacacacagg 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 agaccacctccaaatgtttatttgcaagtgtaaagtgaacttctaccaggtacacacagg 264

                                                                       
Query: 601 atggcaagggtgccttctgtcacactgcagcgtgcagcccaagagagaatgtcagctggt 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 atggcaagggtgccttctgtcacactgcagcgtgcagcccaagagagaatgtcagctggt 204

              
Query: 661 aac 663
           |||
Sbjct: 203 aac 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1063
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1053
Effective search space:   687609
Effective search space used:   687609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)