NCCCACTGGTNGNNNNCCAGTGGGCGCTATAGACTCCTATAGGGAGAGGA
TCCGCGGAATTCAACCAACCCACTCCCCGCTTTAGAGCCTTTTTTTTTTT
TTATTTTGGATGTTTTACCTTTTTACATTTCAAATGTGATCCCCTTTCTC
GGTTTTCATTCTGGAAACCCTCTATCCCACCCCCTCACCTGCTTCTATGA
GGGTGCTCCCCTACTCACCCACCAACTCATGCTTCTCTGCCCTGGCATTG
CCTACACTGGAGCACGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGNNNNNNTTNNNTTTTTTTTTTTTNNNNNNNNNNNNNNTNN
NNNNNNTNNNNTNNNNNNNNTTNTNNNNTNNNNNNNNTNNTNNTTTTTTT
TTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCC
CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTT
NTNNNNNNNNNNNNNNTNNNNNNNNTTTNNNNTNTNNNTTTNTNNNNNNN
NTTNNNNNTTTNTTTTTTTTTTTTTTTTTTNNNNNNNNNNNNNTNNNNNN
NNTTTTTTTTTTTTTNNTNNNNNNNNTTNNNNNNTNNNNNNNNNNNNNNN
TTTTTNTTTTTTNTTTTTNTTTTTTTTTNNNNNTTTTTNNTNTTNNNNNN
NNNNNNNNNNNTTTTTTNNNNNTTTTTTTTTTTTTNNTTTTNTTTTTTTN
TTTNNTTTTTTTTNNTTTNTTTTTTTTTTTTTTTTNTTTNNNTNTTNTTT
TNNNTNTTTTTTTTTTTTNNTNTTTTTTTTTTTNTTTTTTTTTTTTTTTT
TTTTTNTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTT

NCCTTCTTATTNNNNNCACATGGAGGCTGGGGCGCCXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCAATTAAGTTAACAGGAAAAAAAAA
AATCTTAGAATTGCACTTTTAAAAAGATTACTACGTAAAGCTGCACTTGA
TTATGACGTAGAATTTTGAGTTGTTACTAACGCACAGGCGTGGAATTGTT
ATGTCAGACTGAATTCACACCGTGAGGTTGAGAGACATCAAAGCAGGTTA
AGACTAGGACTAGCTTAGAAATCCCGAATTGCAATCCTCTTCCTGCTGTC
CCCAGCGGGCACATACTTCACATGTGCTTCTTTCTATAAGCTTCAAGTTG
CTAAGTTTTATATTCCATCAATATTGCTATTTTAATCTTCTTGAGTAAGA
AATGTGTTGGTGTTTTTCTTAAAAACAAACAAACAACTAAGTAAGGCCAT
GTAAAGTGCTTGAAACTGAAACTCAGTGCAGTGACTCTTCCTTTCATTAT
TTGTGTACTGTAAATCAACTTGAAAAGATGGTCCTGATTCTTTATAAGAT
ATACTATAAAGACAACCTACATGGAAATACACACATACATAGATACACAC
ACAGACATACACACACACACACACACATACACACACACACACACACACAC
ACACACACACACACACCCCTCTGTAGGTTTTTAAAGATGACATAGGATTA
CTTTAAAATGTGTTTAAAATAACTCANAAAAGACTGAGTTCTTTTTCACA
AATAAGCAATTATTAAAATGAGTATTGTATGAAACCCCTGCTGTAAGAGA
AAATTAATCAATTCTTTTAAGAATGTATGGATTTAAAATACTTTTAAAAT
CCTATTTCATTAATGTGATTACCATTCAAAATTAAGTTATGGAGAGTATC
TCGAATTGTTGCTCATAAGAAATGATCTCTTTTTCATTTAAAACACCTTA
TCCTCTGGAAAAGTTTCAACTATCAGGTAAACTTGTTTGGCACAATGGCT
AAATAAACCCTCCCATTCCCTGAAATAACTTTTAACAATTTTCTAAAAAA
TTGACTGGAGGGGAATTAAAAAAAAAACCTCCCCAATTTTTCTCCCCAAT
GAGGGTTTGTATCCTTAAAAAAAAGTTCTAAATTTCTCCCTTTGTCCACA
CTTTTTTTTTTTTTTAAAATAAACCCTTAAAAACAAAAAAATAAACTTTT
TT

Query= MSMg01no323_i17.g1 MSMg01no323_i17.g1 CHROMAT_FILE:
MSMg01no323_i17.g1 PHD_FILE: MSMg01no323_i17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:07:12 2005
         (772 letters)



>mm_chr8_52052742_52053913
          Length = 1172

 Score = 1317 bits (681), Expect = 0.0
 Identities = 734/766 (95%), Gaps = 22/766 (2%)
 Strand = Plus / Plus

                                                                       
Query: 7   aaaaaaaaatcttagaattgcacttttaaaaagattactacgtaaagctgcacttgatta 66
           |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||
Sbjct: 207 aaaaaaaaatcttagaattgcaattttaaaaagattactaagtaaagctgcacttgatta 266

                                                                       
Query: 67  tgacgtagaattttgagttgttactaacgcacaggcgtggaattgttatgtcagactgaa 126
           ||||||||||||||||||||||||||| |||||||||||||| | | |||||||||||||
Sbjct: 267 tgacgtagaattttgagttgttactaatgcacaggcgtggaactctcatgtcagactgaa 326

                                                                       
Query: 127 ttcacaccgtgaggttgagagacatcaaagcaggttaagactaggactagcttagaaatc 186
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ttcacaccgtggggttgagagacatcaaagcaggttaagactaggactagcttagaaatc 386

                                                                       
Query: 187 ccgaattgcaatcctcttcctgctgtccccagcgggcacatacttcacatgtgcttcttt 246
           |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 387 ccgaattgcaatcctcttcctgctgtccccagcgggcacatacttcccatctgcttcttt 446

                                                                       
Query: 247 ctataagcttcaagttgctaagttttatattccatcaatattgctattttaatcttcttg 306
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ctataagcttcaagttgctaagttttatattccatcaatattgctattttaatcttcttg 506

                                                                       
Query: 307 agtaagaaatgtgttggtgtttttcttaaaaacaaacaaacaactaagtaaggccatgta 366
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 agtaagaaatgtgttggtgtttttcttaaaaacaaacaaacaactaagtaaggccatgta 566

                                                                       
Query: 367 aagtgcttgaaactgaaactcagtgcagtgactcttcctttcattatttgtgtactgtaa 426
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 aagtgcttgaaactgaaactcagtgcagtgactcttcctttcattatttgtgtactgtaa 626

                                                                       
Query: 427 atcaacttgaaaagatggtcctgattctttataagatatactataaagacaacctacatg 486
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 atcaacttgaaaagatggtcctgattctttataagatatactataaagacaacctacatg 686

                                                                       
Query: 487 gaaatacacacatacatagatacacacacagacatacacacacacacacacacatacaca 546
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 gaaatacacacatacatagatacacacacagacatacacacacacacacacacatacaca 746

                                                                       
Query: 547 cacacacacacacacacacacacacacacacacccctctgtaggtttttaaagatgacat 606
           |||||||||||||                      |||||||||||||||||||||||||
Sbjct: 747 cacacacacacac----------------------ctctgtaggtttttaaagatgacat 784

                                                                       
Query: 607 aggattactttaaaatgtgtttaaaataactcanaaaagactgagttctttttcacaaat 666
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 785 aggattactttaaaatgtgtttaaaataactcaaaaaagactgagttctttttcacaaat 844

                                                                       
Query: 667 aagcaattattaaaatgagtattgtatgaaacccctgctgtaagagaaaattaatcaatt 726
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 aagcaattattaaaatgagtattgtatgaaacccctgctgtaagagaaaattaatcaatt 904

                                                         
Query: 727 cttttaagaatgtatggatttaaaatacttttaaaatcctatttca 772
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 905 cttttaagaatgtatggatttaaaatacttttaaaatcctatttca 950


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 772
Length of database: 1172
Length adjustment: 10
Effective length of query: 762
Effective length of database: 1162
Effective search space:   885444
Effective search space used:   885444
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)