Query= MSMg01no325_i02.b1 MSMg01no325_i02.b1 CHROMAT_FILE:
MSMg01no325_i02.b1 PHD_FILE: MSMg01no325_i02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:01 2005
(175 letters)
>mm_chr8_65848544_65849116
Length = 573
Score = 277 bits (143), Expect = 3e-79
Identities = 161/169 (95%), Gaps = 6/169 (3%)
Strand = Plus / Minus
Query: 5 gaattcatattaagatgtcacatgtctaaatgactgcttcaaaaaagctcattgtagtat 64
|||||||||||||||||| | |||||||||||||||||||||||||||||||||| ||||
Sbjct: 322 gaattcatattaagatgt-a-atgtctaaatgactgcttcaaaaaagctcattgttgtat 265
Query: 65 atggttacattcttaagtttcctaaaactatctcattactctgttcactcagtttgcagt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 atggttacattcttaagtttcctaaaactatctcattactctgttcactcagtttgcagt 205
Query: 125 tgtgtgtggttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt 173
|||||| ||||||||||||||||||||||||||||||||| |||||
Sbjct: 204 tgtgtg----tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgt 160
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 12
Number of successful extensions: 12
Number of sequences better than 10.0: 1
Number of HSP's gapped: 11
Number of HSP's successfully gapped: 1
Length of query: 175
Length of database: 573
Length adjustment: 8
Effective length of query: 167
Effective length of database: 565
Effective search space: 94355
Effective search space used: 94355
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no325_i02.g1 MSMg01no325_i02.g1 CHROMAT_FILE:
MSMg01no325_i02.g1 PHD_FILE: MSMg01no325_i02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:01 2005
(344 letters)
>mm_chr8_65663507_65664250
Length = 744
Score = 600 bits (310), Expect = e-176
Identities = 337/346 (97%), Gaps = 4/346 (1%)
Strand = Plus / Plus
Query: 1 tgcactggagaggaagtgatatgttctgttctaagatcattttgtgagtcaaataaggga 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgcaatggagaggaagtgatatgttctgttctaagatcattttgtgagtcaaataaggga 260
Query: 61 agcaaaacccaatccgctagagttctgaattagtaggatgcttaaaatcatatgctattt 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agcaaa-cccaatccgctagagttctgaattagtaggatgcttaaaatcatatgctattt 319
Query: 121 atttaagcaggaaaataaaattgatgaacacactgtcataaacgatgttttagtaaataa 180
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 320 atttaagcaggaaaataaaattgatgaacacactgtcataaatgatgttttagtaaataa 379
Query: 181 aaatgtcaccaatttt-atttacaaaatttgagaaatatatatgtaatgttgttgggttt 239
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 aaatgtcaccaatttttatttacaaaatttgagaaatatatatgtaatgttgttgggttt 439
Query: 240 ttaaatgcaaaatatacagagcactccctgggttaactacccag-taatggcttttgaga 298
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||
Sbjct: 440 ttaaatgcaaaatatacagagcactccctgggttaactacccagcta-tggcttttgaga 498
Query: 299 aaaccaataactgttataattgagaagcgagcgagtgataatattt 344
|||||| |||||||||||||||||||||||| |||||| |||||||
Sbjct: 499 aaaccagtaactgttataattgagaagcgagtgagtgacaatattt 544
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
