Query= MSMg01no325_i03.b1 MSMg01no325_i03.b1 CHROMAT_FILE:
MSMg01no325_i03.b1 PHD_FILE: MSMg01no325_i03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:01 2005
(628 letters)
>mm_chr8_26147469_26148496
Length = 1028
Score = 1152 bits (596), Expect = 0.0
Identities = 614/620 (99%)
Strand = Plus / Minus
Query: 6 gaattccgcaaagcctgccggagacctgacttgctaagagttatttcgctaaagagcaaa 65
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 825 gaattccgcaaagcctgcaggagacctgacttgctaagagttatttcgctaaagagcaaa 766
Query: 66 gagccaagcgcaaggattctggcttctaaattgaagctacagcagtgcgtattggtggct 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 765 gagccaagcgcaaggattctggcttctaaattgaagctacagcagtgcgtattggtgact 706
Query: 126 ggtgtttctttctccccggtatcccacagcaaaactaaaggctgactgtaggagctagta 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 705 ggtgtttctttctccccggtatcccacagcaaaactaaaggctgactgtaggagctagta 646
Query: 186 gtgagcatttggtgggcttgtttagccttagcactcgcttgcatgcaaggaaacccaaat 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 gtgagcatttggtgggcttgtttagccttagcactcgcttgcatgcaaggaaacccaaat 586
Query: 246 ggagagcaaacttagtttgttctgagtcacaacgccagttggtagtgggaactaagagct 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 ggagagcaaacttagtttgttctgagtcacaacgccagttggtagtgggaactaagagct 526
Query: 306 agattctgacgctgtggcagtagtgtgagcacagggttagcaccaggtttggcctgttcg 365
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 agattctgaggctgtggcagtagtgtgagcacagggttagcaccaggtttggcctgttcg 466
Query: 366 ctgcagatgacacacacacaggttcccacactgatctaaaggaggagacatcatcctgga 425
|||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 465 ctgcagatgacagacacacaggttcccacactgatctaaaggaggagacaccatcctgga 406
Query: 426 cccagatctcagttgtgttcagaaaagatggccaggacgagcttcaggcagctcacaaag 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 cccagatctcagttgtgttcagaaaagatggccaggacgagcttcaggcagctcacaaag 346
Query: 486 cacatggaagtgggtaaggcaagagtaaatgcatgagaaaactggaaacgtagctgataa 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 cacatggaagtgggtaaggcaagagtaaatgcatgagaaaactggaaacgtagctgataa 286
Query: 546 acatgaggcttcctgcgactcacacacaaaggctggattccctgatttccctcccttctg 605
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 acgtgaggcttcctgcgactcacacacaaaggctggattccctgatttccctcccttctg 226
Query: 606 ctcacgctactgacttgttc 625
||||||||||||||||||||
Sbjct: 225 ctcacgctactgacttgttc 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 628
Length of database: 1028
Length adjustment: 10
Effective length of query: 618
Effective length of database: 1018
Effective search space: 629124
Effective search space used: 629124
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no325_i03.g1 MSMg01no325_i03.g1 CHROMAT_FILE:
MSMg01no325_i03.g1 PHD_FILE: MSMg01no325_i03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:10:01 2005
(558 letters)
>mm_chr8_25974831_25975787
Length = 957
Score = 944 bits (488), Expect = 0.0
Identities = 531/558 (95%), Gaps = 22/558 (3%)
Strand = Plus / Plus
Query: 1 attttgatttaaatagagaattccatagagggaatatctggtttcttaggctaaaactca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attttgatttaaatagagaattccatagagggaatatctggtttcttaggctaaaactca 260
Query: 61 cacatcaaaggaagacatgtttaaaaactgcgaagagagacttatatttgtatgaagaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cacatcaaaggaagacatgtttaaaaactgcgaagagagacttatatttgtatgaagaaa 320
Query: 121 ctgtagtgaattcaaatgtttgcccttaaatttagagagcagtttcaggcacatagatca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctgtagtgaattcaaatgtttgcccttaaatttagagagcagtttcaggcacatagatca 380
Query: 181 tctctaaacctggcagtgggttgcaggcagtaggccagatgtcagcatctgtcttttccc 240
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctctaaacctggcagtgtgttgcaggcagtaggccagatgtcagcatctgtcttttccc 440
Query: 241 ttgtctaggttctgtagactgtcggctgtttcacgccatcagcctttacaaggaaagacc 300
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 441 ttgtctaggttctgtagactgtcggctgtttca-gccatcagcctttacaaggaaagacc 499
Query: 301 tggaccttccccaggctgattgtgaatcatttactagcaattggatgctccccctgttac 360
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 500 tggaccttccccaggctgattgtgaatcatttactagcaattggatgcttttcctgttac 559
Query: 361 tcagcttaatgccatcttaactgcatctaaatcgaaacaaaacgaaaaaaaacaaaaaaa 420
||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 560 tcagcttaatgccatcttaactggatctaaatcgaaacaaaa------------------ 601
Query: 421 aaaaaaaaaaaaaaacctcagcaacttccatgagaataaattttctaaatgcaaagaaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 --aaaaaaaaaaaaacctcagcaacttccatgagaataaattttctaaatgcaaagaaat 659
Query: 481 tgagatttgggggcagggagccaaatgaaaattattggcaatgaaaaaaaaatcacagtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 660 tgagatttgggggcagggagccaaatgaaaattattggcaatgaaaaaaaa-tcacagtg 718
Query: 541 agaagcaccatcaacaga 558
||||||||||||||||||
Sbjct: 719 agaagcaccatcaacaga 736
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 558
Length of database: 957
Length adjustment: 10
Effective length of query: 548
Effective length of database: 947
Effective search space: 518956
Effective search space used: 518956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
