Query= MSMg01no329_c24.b1 MSMg01no329_c24.b1 CHROMAT_FILE:
MSMg01no329_c24.b1 PHD_FILE: MSMg01no329_c24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:14:33 2005
(528 letters)
>mm_chr8_120098568_120099495
Length = 928
Score = 973 bits (503), Expect = 0.0
Identities = 521/527 (98%)
Strand = Plus / Minus
Query: 2 ggaattcaaggccagtctgccctaaagagggagttcaatggcagtttgagcaacttagta 61
||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 743 ggaattcaaggccagcctgggctaaagagggagttcaatggcagtttgagcaacttagta 684
Query: 62 aaacatgtctcaaaaacgtgtatcacaggggaacgtttaacggcatcttctcgccagaca 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 aaacatgtctcaaaaacgtgtatcacaggggaacgtttaacggcatcttctcgccagaca 624
Query: 122 ccagcatggtacccaagaatacacacacacacatactagggtgactttgtaccatcagat 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 ccagcatggtacccaagaatacacacacacacatactagggtgactttgtaccatcagat 564
Query: 182 aatgacatcccaacaggaaactcctgtgactcttccaccacactaggagccaccacatag 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 aatgacatcccaacaggaaactcctgtgactcttccaccacactaggagccaccacatag 504
Query: 242 atgccatctggggagtcttagttctcatcccccaggggaccagcaggtttggtcagccta 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 atgccatctggggagtcttagttctcatcccccaggggaccagcaggtttggtcagccta 444
Query: 302 gtcacctcctcccatccagaaggaatggccacccaggaaaacactcctggtgtggcccct 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gtcacctcctcccatccagaaggaatggccacccaggaaaacactcctggtgtggcccct 384
Query: 362 ggggatgatctgccaccacccagggcgagggacatcttattcaagccctcaagtcccctg 421
|||||||||||| ||||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 383 ggggatgatctggcaccagccagggtgagggacatcttattcaagccctcaagtcccctg 324
Query: 422 ccattgcttgctcattggaagtcgcgacaagattcagcacgccatgttatccttttccaa 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 ccattgcttgctcattggaagtcgcgacaagattcagcacgccatgttatccttttccaa 264
Query: 482 tgtgaacgcccttgatctccttcagctgtcttcctgctctaactaaa 528
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tgtgaacgcccttgatctccttcagctgtcttcctgctctaactaaa 217
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 528
Length of database: 928
Length adjustment: 10
Effective length of query: 518
Effective length of database: 918
Effective search space: 475524
Effective search space used: 475524
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no329_c24.g1 MSMg01no329_c24.g1 CHROMAT_FILE:
MSMg01no329_c24.g1 PHD_FILE: MSMg01no329_c24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:14:33 2005
(411 letters)
>mm_chr8_119919372_119920181
Length = 810
Score = 764 bits (395), Expect = 0.0
Identities = 407/411 (99%), Gaps = 1/411 (0%)
Strand = Plus / Plus
Query: 1 accctaactcttccagaggtatttagacttgcccggtggcgcggtggcacggtggcatgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 accctaactcttccagaggtatttagacttgcccggtggcgcggtggcacggtggcatgg 260
Query: 61 tggcacaggtctgggggaggagaagcttgggaagaagttaattggccagagttggtgtca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggcacaggtctgggggaggagaagcttgggaagaagttaattggccagagttggtgtca 320
Query: 121 aaagcctgaggcccttgtgacattaggtgctttgagttttcacagtagccccagcgcata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaagcctgaggcccttgtgacattaggtgctttgagttttcacagtagccccagcgcata 380
Query: 181 cggagagccaaaggcaggcagagatactcacgggaacacaaatcagctcctaacagggct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cggagagccaaaggcaggcagagatactcacgggaacacaaatcagctcctaacagggct 440
Query: 241 gcagtgtggtagtaggattgtaccaggtaaatgtgttcctggagtggtaggaaaaccagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcagtgtggtagtaggattgtaccaggtaaatgtgttcctggagtggtaggaaaaccagc 500
Query: 301 gcagatctaccaaggcttgggtcatactctgtgcaaggggctgtgtcccgccctcaaacg 360
|||||||||||||||||||||||| |||||||||||||||||||||| | |||||||||
Sbjct: 501 gcagatctaccaaggcttgggtcagactctgtgcaaggggctgtgtct-gtcctcaaacg 559
Query: 361 ggatagatttctaggaccatgataatacacgatacccagaaggtcagggtc 411
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ggatagatttctaggaccatgataatacacgatacccagaaggtcagggtc 610
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 810
Length adjustment: 9
Effective length of query: 402
Effective length of database: 801
Effective search space: 322002
Effective search space used: 322002
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
