Query= MSMg01no330_c06.b1 MSMg01no330_c06.b1 CHROMAT_FILE:
MSMg01no330_c06.b1 PHD_FILE: MSMg01no330_c06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:48 2005
(234 letters)
>mm_chr8_100363687_100364320
Length = 634
Score = 441 bits (228), Expect = e-128
Identities = 232/234 (99%), Gaps = 2/234 (0%)
Strand = Plus / Plus
Query: 1 taagcctttctaatttctaaaatttttactattgacttaatttatatttactctgttgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taagcctttctaatttctaaaatttttactattgacttaatttatatttactctgttgta 260
Query: 61 gggggtcttaatatatgtacttgctgttcaaaacttaaaaatctcaaggataaaaaaaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gggggtcttaatatatgtacttgctgttcaaaacttaaaaatctcaaggataaaaaaa-- 318
Query: 121 tacctctgaatgcccagcaagttttacagtgcccggaacatcacaggtgcttaatcaaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 tacctctgaatgcccagcaagttttacagtgcccggaacatcacaggtgcttaatcaaca 378
Query: 181 cttactggtaagaaaagtacatggtagtataataataagctagattagaaatac 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 cttactggtaagaaaagtacatggtagtataataataagctagattagaaatac 432
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 634
Length adjustment: 9
Effective length of query: 225
Effective length of database: 625
Effective search space: 140625
Effective search space used: 140625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no330_c06.g1 MSMg01no330_c06.g1 CHROMAT_FILE:
MSMg01no330_c06.g1 PHD_FILE: MSMg01no330_c06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:48 2005
(291 letters)
>mm_chr8_100537111_100537803
Length = 693
Score = 487 bits (252), Expect = e-142
Identities = 280/290 (96%), Gaps = 2/290 (0%)
Strand = Plus / Minus
Query: 1 attcacacatactcaatatatctctcatgggggttacactcctgccagcccgatcctttg 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 490 attcacacatactcaatatatctctcatgggggttacactcctgccagaaggatcctttg 431
Query: 61 gcaactagggagtagaggcagtttcccatgtggattctatttccaggctcaattttaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 gcaactagggagtagaggcagtttcccatgtggattctatttccaggctcaattttaata 371
Query: 121 taa--gaatatatatttctggccaagtaccatcttttaaaatatctattttgtttttcaa 178
||| |||||| ||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 370 taatttaatatacatttctggccaagtaccatcttttaaaatatctattttgtttttcga 311
Query: 179 tcttgactcccaaagacaacctagaaattgaaggaacatgaaatcactaggtacacatag 238
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 310 tcttgactcccaaagacaacctagaaattgaaggaacatgaaaccactaggtacacatag 251
Query: 239 ttgaatttgttagcttacttaaagaaaaaacaataaaccacttggatggt 288
||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 250 ttgaatttgttggcttacttaaagaaaaaacaataaaccacttggatggt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 693
Length adjustment: 9
Effective length of query: 282
Effective length of database: 684
Effective search space: 192888
Effective search space used: 192888
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
