CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCACTAATTTACGCATGCTAGCTATGTTTTTAGAACCCCACGACAAAT
CCTTCCTGTTGACTGGGTCTTATGCCCAACTTGAGATGTATTGCTTATCA
ATGATGTATGTATGCCACCACTGCTCCTTTACGGTTATTATGCCATGCTA
GACAGTGCAGCTCATGCATATTGCAGATGCAAAGGAGATTTAGGTGTAAC
TTTCCTTTGTAATATACATGACAATTGTGGGAAACATACTGGCTACTCCT
CAAAGACGACATTTTCAGTCCTATATAACCCAGAGATTTCTGATTGCCAC
TTCAGAAGCTCGCAGTTTCTCCAACAATAAGTACTGACCTATGTTTGATG
CCGACTCATGCACATACCCACACTCCGTCTCATTTTGCCGAATTTGATGA
ATTAACTTGTACCACACACCTACACATGCTGTTATGACTTCCTTTCTCAA
TTATCATCTAACTTAAGAGCTTTTTTTCTGTTTGTTTCGCTTTGCCTCGT
TTTGTGTTTGTCACACAATTTTTCTCTGTTTTGTCCTGACTGTCCCTGGA
ACCCACGTCGTACAGTATCTTGCTCCCTTTTTTAGAAATCCTTCTGTCCC
TGCCTCCTAAGTGATGGTATTATAGCTGTTGCGACTCCATTCCCTCCTAT
ATGAAAAATCTTTTAAGTGAACTTTACC

ATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCATATTTTAAAGAGACAATGTCCACCA
TATGACAACATTCTATTTGCAAATAACAACAAAAACAAAAGCTGTACAGT
TAATATAGAACTCACCAAAGATGCTCCATTTCCCTTGTCATGAGTCCCTA
CACATACACACAAACACACACACACACACACACACACACACACACACACT
ATACACACACACACACAAACCCCACACATACACTATAAACACACACCCCA
CACACGGAGAGACACACACACACCACATACATATACACACCACACACACA
CACACACACACACACACACACACACACACACACACACACACACACACACA
AATACAACACATACACACACACACACACACGCACACATCCCACACAAAGA
AACACACACATCACAAACACACAGACATACACACACCCACACACCCACAC
ACCCACACACCCACACACCAATTTGGGCATAATTTCAACTAAATTGACAA
AAACAAGTATTTACCTTTATATATGAGGTGTACAGAATCAGGCGATAGCC
ATTTCCCTTGTTCCTCTAAACAGGATGAGGAGGATGAAAGACTAGAGAAT
GTTTATCCAATAAAAAAATCACTAATGTGATAGACTTGGATTCACTTTCA
ACAACTCAAAAGATGACTGAAAGCATGGATTCTG

Query= MSMg01no331_a14.g1 MSMg01no331_a14.g1 CHROMAT_FILE:
MSMg01no331_a14.g1 PHD_FILE: MSMg01no331_a14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:16:53 2005
         (661 letters)



>mm_chr8_104612740_104613800
          Length = 1061

 Score =  723 bits (374), Expect = 0.0
 Identities = 411/440 (93%), Gaps = 28/440 (6%)
 Strand = Plus / Minus

                                                                        
Query: 226  cacacacggagagacacacacacaccacatacatatacacaccacacacacacacacaca 285
            ||||||| ||||||||||||||||||||||||||||||||||                ||
Sbjct: 1061 cacacacagagagacacacacacaccacatacatatacacac----------------ca 1018

                                                                        
Query: 286  cacacacacacacacacacacacacacacacacacacacacaaatacaacacat----ac 341
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||
Sbjct: 1017 cacacacacacacacacacacacacacacacacacacacacaaatacaacacatacacac 958

                                                                        
Query: 342  acacacacacacacacgcacacatcccacacaaagaaacacacacatcacaaacacacag 401
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 957  acacacacacacacacgcacacatcccacacaaagaaacacacacatcacaaacacacag 898

                                                                        
Query: 402  acatacacacacccacacacccacacacccacacacccacacaccaatttgggcataatt 461
            |||||        |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897  acata--------cacacacccacacacccacacacccacacaccaatttgggcataatt 846

                                                                        
Query: 462  tcaactaaattgacaaaaacaagtatttacctttatatatgaggtgtacagaatcaggcg 521
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845  tcaactaaattgacaaaaacaagtatttacctttatatatgaggtgtacagaatcaggcg 786

                                                                        
Query: 522  atagccatttcccttgttcctctaaacaggatgaggaggatgaaagactagagaatgttt 581
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785  atagccatttcccttgttcctctaaacaggatgaggaggatgaaagactagagaatgttt 726

                                                                        
Query: 582  atccaataaaaaaatcactaatgtgatagacttggattcactttcaacaactcaaaagat 641
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725  atccaataaaaaaatcactaatgtgatagacttggattcactttcaacaactcaaaagat 666

                                
Query: 642  gactgaaagcatggattctg 661
            ||||||||||||||||||||
Sbjct: 665  gactgaaagcatggattctg 646


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 191
Number of extensions: 40
Number of successful extensions: 39
Number of sequences better than 10.0: 1
Number of HSP's gapped: 29
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1061
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1051
Effective search space:   684201
Effective search space used:   684201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)