Query= MSMg01no331_b09.b1 MSMg01no331_b09.b1 CHROMAT_FILE:
MSMg01no331_b09.b1 PHD_FILE: MSMg01no331_b09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:16:56 2005
(344 letters)
>mm_chr8_116499024_116499769
Length = 746
Score = 601 bits (311), Expect = e-176
Identities = 336/345 (97%), Gaps = 2/345 (0%)
Strand = Plus / Plus
Query: 1 gaacagagacctggatgagcagcagcatcgaggataccagaggctgagacctgatcactt 60
||||||||||||||||||||||||||||| |||||||||||||||||| |||||||| ||
Sbjct: 201 gaacagagacctggatgagcagcagcatcaaggataccagaggctgagtcctgatcattt 260
Query: 61 ttctcctctgagtctcactttacactgtctgctaattaataactagactaaagtcattct 120
|||||||||| |||||||||||| |||||||||||| |||||||||||||||||||||||
Sbjct: 261 ttctcctctgggtctcactttaccctgtctgctaatcaataactagactaaagtcattct 320
Query: 121 cgtggcactcagtctacacttacccaggccctactgtcagaatcagaactggtttactcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cgtggcactcagtctacacttacccaggccctactgtcagaatcagaactggtttactcc 380
Query: 181 ctagaggccccggcacaatgtatacctcagagctccagtttttaacacagactccagcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 381 ctagaggccccggcacaatgtatacctcagagctccagtttttaacacagactccagtat 440
Query: 241 tatctcctgacttactgctttaaggggtcccctgtggctttaagcctctctcaaaaaa-- 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tatctcctgacttactgctttaaggggtcccctgtggctttaagcctctctcaaaaaaaa 500
Query: 299 tggcggcatatccccagggaaagagtatagcagagagtagccagt 343
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tggcggcatatccccagggaaagagtatagcagagagtagccagt 545
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 746
Length adjustment: 9
Effective length of query: 335
Effective length of database: 737
Effective search space: 246895
Effective search space used: 246895
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no331_b09.g1 MSMg01no331_b09.g1 CHROMAT_FILE:
MSMg01no331_b09.g1 PHD_FILE: MSMg01no331_b09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:16:56 2005
(535 letters)
>mm_chr8_116658780_116659709
Length = 930
Score = 911 bits (471), Expect = 0.0
Identities = 517/535 (96%), Gaps = 5/535 (0%)
Strand = Plus / Minus
Query: 1 aagactatgttccaaaataagaaataaaggagcttttgggatgtagctcagtagtaaagc 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 843 aagactatgttccaaaataagaaataaaggagcttttgggatgtagctcggtagtaaagc 784
Query: 61 gtttgctgagtaagggaggccctggttctgttcctagtgctttggaggaaaaattactat 120
||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||||
Sbjct: 783 atttgctgagtaagggaggccctggttctgtttctagtgctttggaggagaaattactat 724
Query: 121 tgctataggaagacaggacaggtgtgccaaaaactcctcctgaggcttgcctggtccttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 tgctataggaagacaggacaggtgtgccaaaaactcctcctgaggcttgcctggtccttc 664
Query: 181 caccattcacaaacccagttaccttgtaaatgtgattctcaaacccaaagagccacagga 240
|||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct: 663 caccattcacaaacccagacaccttgtaaatgtgattctcaaacccaaacagccacagga 604
Query: 241 tctgctacatggcggtgcccaacagactcctccagcacttaccccaaaacctgactcggt 300
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 tctgctacaaggcggtgcccaacagactcctccagcacttaccccaaaacctgactcggt 544
Query: 301 gactttgaggtgaggcccgagggtgagcgcttgatccaacttccacaccgacaaggttgc 360
||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 543 gactttgaggtgaggcccgagggtgagcgcttgatccaacttccaaagtgacaaggttgc 484
Query: 361 cgctgtggcagctcaagggactgtaccattactgatagttaccgccaaagtttagattca 420
| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 483 ctctgtggcagctcaagggactgtaccatcactgatagttaccgccaaagtttagattca 424
Query: 421 gcaccacaaatgggactgttttcatgtggctctttccgagtccctcggatgagctctatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 gcaccacaaatgggactgttttcatgtggctctttccgagtccctcggatgagctctatg 364
Query: 481 ctttattttatgctgcttgtttgcatggtgtgtgacagtgaccaccttattcatg 535
| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 c-----tttatgctgcttgtttgcatggtgtgtgacagtgaccaccttattcatg 314
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 535
Length of database: 930
Length adjustment: 10
Effective length of query: 525
Effective length of database: 920
Effective search space: 483000
Effective search space used: 483000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
