TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCAGAAATCCGCGGA
ATTCTTTTCTACTTCCCTTAATGATGAAAGGTAATTTCTCTCCAATTGAA
GGTGTATTTGCCTCATAGATTTCTATGAGTAATGGACTACAACAGTAGAA
CCAGAAGAAGAGCTTCCATAATTGGAGAGAAGACATCTGTTGGCTTCCTC
CTGAGTCTTTCAAAACAAATCTTACCAAACAAGCTGCCATGGTAAGCATC
TCGCATATACCAAACCCAAACACTGATGTGGATCCTGGGAAGTGCTTGCT
GGCTGGAGCCTAATATGGCTGTCTCCTGAAAGGCTCTGCAGAGCCTTATA
AATACAGAGGCAGATGCTCTCAGCCAACCATTGAACTGAGCGCAGGGTCC
CTAATAGAGGAGTTTTACCCCCCCCCCGAAGGAGCTGAAGGGGTTTGCAA
CTCCATAGGAAGAAGAACAATATCAACTAACCAGGCCCCCGAGAACTCCC
AGGAACTAAAGTACCAACCATAGAGTACACATGGAGGGACCCATGGCTCT
AGTTGCATATGTAGCCGAGGATAGGTTTGCTGGTTTTCATTTGGAGGACA
GGTCTCTGTCTTCTGTCGTTCCTCTTTGCTCTACCGTACACTTATGTCAG
TCCCCGCTATTTCTTCGTCGCTTACATTCCCTTCCCTCGATTTCCCTCCT
TTCCGCTTCCCTCTTACTTTCCATTTCTTCGCTCTGTCTTCTCCCCTTTT
TTTTT

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXAAGGGTTTCTTATTAGATAATGTTGCATGTAAAATTG
GTGGTTATTTTAAAGATGAGTCAGATTTAAAATTTTTACTCCTTTAAAAG
CCTCAAAGGCTATGACATTTATCAGTATGACTGTTGATCATGGTATTCTG
ATGGTGTGAGGCAGAATAACGCTTCTATCAAGTTAGGTTACTTGTCCCAG
GTGTTAGGTATCTATAATAGAAAGACACTAAACTGCAACATTTGGAGATA
AGGGTTGGGTGACTTAATGCTGGCACCCAAATCCGAGGCTTGCTCCCTAG
CAAGTACCGTCTCGTGAAGTTGCATCCCCAGCCCCTCCCAGTTTTAAAGG
AGGCTACTGTGCAGCTGCGTTCTGAACTTTATTTTTGAGTAGGAGTATCC
AAAGATTCAGAAATAACAGTTTTATCAGAATCTCTGGCACTAGGTCCCAC
TAGCAACCATGGTCCGTTAACTAAAATTGGCAAACTTCAATAGGAGAGGT
ATTCTGTGGGCATGGAAAGTTGAATCACTCACTTTTTGTTTTGTTTTGTT
TTGGCAGTGTGGCAACGTCATTTTGCCTTACAAAAGTCCCTATGTTGGAA
TGGAGGCCACAGTGTCAGCTGTGAGGTAGATGCTGAGGGCAGACAGGATT
TGAAGTGACAGTGAAACCAGCCTTAGTGGTAGCAAGACTGG

Query= MSMg01no331_e23.b1 MSMg01no331_e23.b1 CHROMAT_FILE:
MSMg01no331_e23.b1 PHD_FILE: MSMg01no331_e23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:17:11 2005
         (371 letters)



>mm_chr8_46223771_46224541
          Length = 771

 Score =  685 bits (354), Expect = 0.0
 Identities = 363/366 (99%)
 Strand = Plus / Minus

                                                                       
Query: 4   gaattcttttctacttcccttaatgatgaaaggtaatttctctccaattgaaggtgtatt 63
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 gaattcttttctactccccttaatgatgaaaggtaatttctctccaattgaaggtgtatt 342

                                                                       
Query: 64  tgcctcatagatttctatgagtaatggactacaacagtagaaccagaagaagagcttcca 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 tgcctcatagatttctatgagtaatggactacaacagtagaaccagaagaagagcttcca 282

                                                                       
Query: 124 taattggagagaagacatctgttggcttcctcctgagtctttcaaaacaaatcttaccaa 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 281 taattggagagaagacatctgttggcttcctcctgagtctttcaaaacaaatcttgccaa 222

                                                                       
Query: 184 acaagctgccatggtaagcatctcgcatataccaaacccaaacactgatgtggatcctgg 243
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 221 acaagctgccatggtaagcatctcccatataccaaacccaaacactgatgtggatcctgg 162

                                                                       
Query: 244 gaagtgcttgctggctggagcctaatatggctgtctcctgaaaggctctgcagagcctta 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 gaagtgcttgctggctggagcctaatatggctgtctcctgaaaggctctgcagagcctta 102

                                                                       
Query: 304 taaatacagaggcagatgctctcagccaaccattgaactgagcgcagggtccctaataga 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 101 taaatacagaggcagatgctctcagccaaccattgaactgagcgcagggtccctaataga 42

                 
Query: 364 ggagtt 369
           ||||||
Sbjct: 41  ggagtt 36


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 771
Length adjustment: 9
Effective length of query: 362
Effective length of database: 762
Effective search space:   275844
Effective search space used:   275844
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no331_e23.g1 MSMg01no331_e23.g1 CHROMAT_FILE:
MSMg01no331_e23.g1 PHD_FILE: MSMg01no331_e23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:17:12 2005
         (666 letters)



>mm_chr8_46069511_46070576
          Length = 1066

 Score = 1241 bits (642), Expect = 0.0
 Identities = 660/666 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   aagggtttcttattagataatgttgcatgtaaaattggtggttattttaaagatgagtca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagggtttcttattagataatgttgcatgtaaaattggtggttattttaaagatgagtca 260

                                                                       
Query: 61  gatttaaaatttttactcctttaaaagcctcaaaggctatgacatttatcagtatgactg 120
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gatttaaaattttcactcctttaaaagcctcaaaggctatgacatttatcagtatgactg 320

                                                                       
Query: 121 ttgatcatggtattctgatggtgtgaggcagaataacgcttctatcaagttaggttactt 180
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 321 ttgatcatggtattctgatggtgtgagacagaataacgcttctatcaagttaggttactt 380

                                                                       
Query: 181 gtcccaggtgttaggtatctataatagaaagacactaaactgcaacatttggagataagg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtcccaggtgttaggtatctataatagaaagacactaaactgcaacatttggagataagg 440

                                                                       
Query: 241 gttgggtgacttaatgctggcacccaaatccgaggcttgctccctagcaagtaccgtctc 300
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 441 gttgggtgacttaatgctggcacccaaatccgaggcttgctccctagcaagtgccgtctc 500

                                                                       
Query: 301 gtgaagttgcatccccagcccctcccagttttaaaggaggctactgtgcagctgcgttct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 501 gtgaagttgcatccccagcccctcccagttttaaaggaggctactgtgcagttgtgttct 560

                                                                       
Query: 361 gaactttatttttgagtaggagtatccaaagattcagaaataacagttttatcagaatct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaactttatttttgagtaggagtatccaaagattcagaaataacagttttatcagaatct 620

                                                                       
Query: 421 ctggcactaggtcccactagcaaccatggtccgttaactaaaattggcaaacttcaatag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctggcactaggtcccactagcaaccatggtccgttaactaaaattggcaaacttcaatag 680

                                                                       
Query: 481 gagaggtattctgtgggcatggaaagttgaatcactcactttttgttttgttttgttttg 540
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gagaggtgttctgtgggcatggaaagttgaatcactcactttttgttttgttttgttttg 740

                                                                       
Query: 541 gcagtgtggcaacgtcattttgccttacaaaagtccctatgttggaatggaggccacagt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gcagtgtggcaacgtcattttgccttacaaaagtccctatgttggaatggaggccacagt 800

                                                                       
Query: 601 gtcagctgtgaggtagatgctgagggcagacaggatttgaagtgacagtgaaaccagcct 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gtcagctgtgaggtagatgctgagggcagacaggatttgaagtgacagtgaaaccagcct 860

                 
Query: 661 tagtgg 666
           ||||||
Sbjct: 861 tagtgg 866


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 666
Length of database: 1066
Length adjustment: 10
Effective length of query: 656
Effective length of database: 1056
Effective search space:   692736
Effective search space used:   692736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)