TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCCAAATCCGCGG
AATTCTTTGTTCATCTCCGAGCCCCATTTTTTAATGGGGTTATTTGATTT
TCTGGTGTCCACTTTCTTGAGTTCTTTATATATATTGGATATTAGTCCCC
TATCTGATTTGGGATAGGTAAAGATCCTTTCCCAATCTGTTGGTGGTCTT
TTTGTCTTATTGACTGTGTCTTTTGCTTTGCAGATGCTTAGCAATTTTAT
GAGGTCCCATTTATCGATTCTTGATCTTACAGCACAAGCCATTGATGTTC
TATTCAGGAATTTTTCCCCTGTACCCATATCTTTGAGGCTTTTCCCTACT
TTCTCCTCTATAAATTTCAGTGTCTCTGGTTTTATGTGGAGTTCCTTAAT
CCACTTAGATTTGACCTTACCACAACGACATAACTATGGATCAATTCGCA
TTCTTCTACATGATAACCGCCAGTTGTGCCAGCACCATTTGTTGAAAATG
CTGTCTTTTTTCCACTGGATGGTTATAGCTCCCTTGTCAAAGATCAAGTT
ACCATAGGTGTGTGGATTCATCTCTGGGTCTTCAATTCTGTTCCATTGGT
CTACTTGTCTGTCACTATACCAGTACCATGCAGTTTTGATCACAATTGCT
CTGTAATACAGTTTTATGTCTGGCATGGTGATTCCACCAGAGGTTCTTTT
ATCCTTGAGAAGAGTTTTTGCTATCCTAGGTTTTTTGTTAT

GCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXACTTCTAGGAGAAATAGAAAACCTG
AGTAATATGAAATATTAAAAGCTCCTAATGGAAAAGAGAGGGGTTTGGGA
GGATCTGTGCTTATTTTTCTTTCTTTTTTAATTCTCTGAGTGGATGACTG
ACCTAAAAATGGAATACAAACTAATATCCTAAAAGGAATATTCTAGCTGA
CAAAGTAACCTACTTTATTCAGAACTGCAGTGCATGGGAGTCACCAAGTC
TTTCCATCTGACTTACTGGGTAATTTAAACCGAATATTATACAAATATTT
CACATTTAAATAATAAAAGAGAAATGCTCCAGCAAACATAAACCTTGTTT
AAGAAGATGAAGCCATATCTCCTGACCCAACGGTAAGATGAACATTTCAA
GCGACATTATTCAGAAGATCTTCTGAGGACACTTGTTAAATAATTTATCT
ATGATAGTAATAATAGATTTGACTAAAAATAAAATGAAGAGAGTTTACAT
TTCTTACAAAATAACTTCCAGGTGAATTGGCAGAAAAAGATACAAAACCA
TACATTAGAGAGAGTCATTCATCTGATCTTAAAATATGAAAAGTTGTTCG
TTAGTTTTATTTAAAACATAATAGGCATGAATAAGACATTGAAGCAGGTC
CCGAGAATTACAACATAGCTAGATCAC

Query= MSMg01no333_k07.g1 MSMg01no333_k07.g1 CHROMAT_FILE:
MSMg01no333_k07.g1 PHD_FILE: MSMg01no333_k07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:20:52 2005
         (652 letters)



>mm_chr8_66129070_66130122
          Length = 1053

 Score = 1141 bits (590), Expect = 0.0
 Identities = 637/656 (97%), Gaps = 7/656 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   acttctaggagaaatagaaaacctgagtaatatgaaatattaaaagctcctaatggaaaa 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 201 acttctaggagaaatagaaaacctgagtaatatgaaatattaaaagctcctacttgaaaa 260

                                                                       
Query: 61  gagaggggtttgggaggatctgtgcttatttttctttcttttttaattctctgagtggat 120
           ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagaggggtttggaaggatctatgcttatttttctttcttttttaattctctgagtggat 320

                                                                       
Query: 121 gactgacctaaaaatggaatacaaactaatatcctaaaaggaatattctagctgacaaag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gactgacctaaaaatggaatacaaactaatatcctaaaaggaatattctagctgacaaag 380

                                                                       
Query: 181 taacctactttattcagaactgcagtgcatgggagtcaccaagtctttccatctgactta 240
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taatctactttattcagaactgcagtgcatgggagtcaccaagtctttccatctgactta 440

                                                                       
Query: 241 ctgggtaatttaaaccgaatattatacaaatatttcacatttaaataataaaagagaaat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctgggtaatttaaaccgaatattatacaaatatttcacatttaaataataaaagagaaat 500

                                                                       
Query: 301 gctccagcaaacataaaccttgtttaagaagatgaagccatatctcctgacccaacggta 360
           ||||||||||||||||||||||| ||||||||||||||||||||||||||   |||||||
Sbjct: 501 gctccagcaaacataaaccttgtgtaagaagatgaagccatatctcctgagtgaacggta 560

                                                                       
Query: 361 agatgaacatttcaagcgacattattcagaagatcttctgaggacacttgttaaataatt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agatgaacatttcaagcgacattattcagaagatcttctgaggacacttgttaaataatt 620

                                                                       
Query: 421 tatctatgatagtaataatagatttgactaaaaataaaatgaagagagtttacatttctt 480
           |||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||
Sbjct: 621 tatctatgatagtaataatagatttgactaaaaataaaa---agagagtttacatttctt 677

                                                                       
Query: 481 acaaaataacttccaggtgaattggcagaaaaagatacaaaaccatacattagagagagt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 acaaaataacttccaggtgaattggcagaaaaagatacaaaaccatacattagagagagt 737

                                                                       
Query: 541 cattcatctgatcttaaaatatgaaaagttgttcgttagttt----tatttaaaacataa 596
           ||||||||||||||||||||||||||||||||||||||||||    |||||||| |||||
Sbjct: 738 cattcatctgatcttaaaatatgaaaagttgttcgttagtttgttttatttaaatcataa 797

                                                                   
Query: 597 taggcatgaataagacattgaagcaggtcccgagaattacaacatagctagatcac 652
           ||||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct: 798 taggcatgaataagacattgaagcaggccccgagaactacaacatagctagatcac 853


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1053
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1043
Effective search space:   669606
Effective search space used:   669606
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)