Query= MSMg01no338_o07.b1 MSMg01no338_o07.b1 CHROMAT_FILE:
MSMg01no338_o07.b1 PHD_FILE: MSMg01no338_o07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:37 2005
(603 letters)
>mm_chr8_59814473_59815476
Length = 1004
Score = 1100 bits (569), Expect = 0.0
Identities = 594/603 (98%), Gaps = 5/603 (0%)
Strand = Plus / Minus
Query: 4 ggaattctcctgaatcttc-c-tttcatgtgcttggattgtaggcttctcaccatgcctg 61
|||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||
Sbjct: 804 ggaattctcctgaatc--cacttttcatgtgcttggattgtaggcttctcaccatgcctg 747
Query: 62 gctcaaagctaaatttttaaaaagaagaataaaagccgtcaaaactaagggtgaaattcc 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 gctcaaagctaaatttttaaaaagaagaataaaagccgtcaaaactaagggtgaaattcc 687
Query: 122 gaaatcaaaggaaccaactaaatgcttgggactggataaccattcactttcattacttcc 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 gaaatcaaaggaaccaactaaatgcttgggactggataaccattcactttcattacttcc 627
Query: 182 aggtaattaaagagtgcgcccatgcccaagatattttaatttagaactgctgtggccctc 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 626 aggtaattaaagagtgcgcccatgcccaagatattttaatttagaactgctgtggtcctc 567
Query: 242 aagagcatgcaaataaacaaacccactctgctaaggactctggccctgcagctcactctg 301
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 566 aagagcatgcaaataaacaaacccactctgctaaggacactggccctgcagctcactctg 507
Query: 302 atgtttatgtctccaaaagtttttcatgttgtatagtcctggctagtaaacaacctgaac 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 atgtttatgtctccaaaagtttttcatgttgtatagtcctggctagtaaacaacctgaac 447
Query: 362 tgctctagtggcaaaggtcaaactgcaaaatgaaagggacttaaaaagaaaccgtcctag 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tgctctagtggcaaaggtcaaactgcaaaatgaaagggacttaaaaagaaaccgtcctag 387
Query: 422 ttaaagatacagtacgcgggg-aaaaaaacaaacaaacagggaataaactcctgctctgt 480
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 386 ttaaagatacagtacgcgggggaaaaaaacaaacaaacagggaataaactcctgctctgt 327
Query: 481 ccatttctgtaaatcagtagatcctgtcccagtcataaaatcgggttgttttttccccca 540
|||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 326 ccatttctgtaaatcagtagatcctgtcccagacataaaattgggttgttttttccccca 267
Query: 541 caaaacaggtgcttacatgatttctagaggacactgggaggaatttcatacagtgatcag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 caaaacaggtgcttacatgatttctagaggacactgggaggaatttcatacagtgatcag 207
Query: 601 gag 603
|||
Sbjct: 206 gag 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 603
Length of database: 1004
Length adjustment: 10
Effective length of query: 593
Effective length of database: 994
Effective search space: 589442
Effective search space used: 589442
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no338_o07.g1 MSMg01no338_o07.g1 CHROMAT_FILE:
MSMg01no338_o07.g1 PHD_FILE: MSMg01no338_o07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:37 2005
(525 letters)
>mm_chr8_59616523_59617448
Length = 926
Score = 1006 bits (520), Expect = 0.0
Identities = 523/524 (99%), Gaps = 1/524 (0%)
Strand = Plus / Plus
Query: 1 aagtaatgaatacctctgatagttaagtaccaaacatgaattaaaaattagaaactgaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aagtaatgaatacctctgatagttaagtaccaaacatgaattaaaaattagaaactgaga 260
Query: 61 gggtgtgtaccaatgatttgcatcattgcaaatcatatgcaatatcatgagtttt-aaaa 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 261 gggtgtgtaccaatgatttgcatcattgcaaatcatatgcaatatcatgagttttaaaaa 320
Query: 120 aaaggtcaaaaaacaaaactgggttttctagaagcacaaagaatgctgaaacaggcagtt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaaggtcaaaaaacaaaactgggttttctagaagcacaaagaatgctgaaacaggcagtt 380
Query: 180 gccccatatctaagccttgtctcttaatccaggattaagtaacagaagcaaacctatcct 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gccccatatctaagccttgtctcttaatccaggattaagtaacagaagcaaacctatcct 440
Query: 240 gttgattctcaattgtttatgtattgaagtcctgaaagtttggagtggcataatgtatta 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gttgattctcaattgtttatgtattgaagtcctgaaagtttggagtggcataatgtatta 500
Query: 300 ttaatatccaattgcagaagcttctggagacagactgcgtaattcataccagagttttat 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttaatatccaattgcagaagcttctggagacagactgcgtaattcataccagagttttat 560
Query: 360 acatctgtccctttgcctcctgggcaaatgttgagcaggactctgatgatataaagatac 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acatctgtccctttgcctcctgggcaaatgttgagcaggactctgatgatataaagatac 620
Query: 420 aaaatagcgaattcatatttacagaaaccccaatgtattttgaagtataaagacataaaa 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaaatagcgaattcatatttacagaaaccccaatgtattttgaagtataaagacataaaa 680
Query: 480 caaataaagctttcttttaggaaattcaaatatcgaaaataaag 523
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 caaataaagctttcttttaggaaattcaaatatcgaaaataaag 724
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 926
Length adjustment: 10
Effective length of query: 515
Effective length of database: 916
Effective search space: 471740
Effective search space used: 471740
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
