Query= MSMg01no339_i07.b1 MSMg01no339_i07.b1 CHROMAT_FILE:
MSMg01no339_i07.b1 PHD_FILE: MSMg01no339_i07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:28:22 2005
(585 letters)
>mm_chr8_129956835_129957819
Length = 985
Score = 965 bits (499), Expect = 0.0
Identities = 556/581 (95%), Gaps = 10/581 (1%)
Strand = Plus / Plus
Query: 5 gaattcttagtgtttcttgacgagttttgtttatgccatcagtttggatgacttagggat 64
|||||||||||| | ||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 205 gaattcttagtggctgttgacgagttttgtttatgccatcagtttggatgatttagggat 264
Query: 65 ttctaatacagtcgatttggaactttccatattgatttcacacttcggggttggaattct 124
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 265 ttctaatacagtcgatttggaactttccatattgatttcacgcttcggggttggaattct 324
Query: 125 ttcagaagacagggatatgggatttcttttcctgcctctctcaggtttttgctttgtttt 184
||||||||||||||||||||| |||||||||| |||||||||||||||||
Sbjct: 325 ttcagaagacagggatatgggttttcttttcccccctctctcaggtttttg--------- 375
Query: 185 gttttgtgcttcttaattattaaatttttttcttactggatgagcatagccatgagcaga 244
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 -ttttgtgcttcttaattattaaatttttttcttactggatgagcatagccatgagcaga 434
Query: 245 taccaattggatgtttgaatcactgcgtcctagatgaaatgcagcagtaaagattccagt 304
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 435 taccaattggatgtttgaatcactgcgtccaagatgaaatgcagcagtaaagattccagt 494
Query: 305 tttgtctcccgcataacttggcaacaagggagaacctcagactaggttagggagcaggac 364
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 tttgtctcccgcataccttggcaacaagggagaacctcagactaggttagggagcaggac 554
Query: 365 tgaattgagcaaggtgaaggacagtcatcgccccacctgggatgaaatgcaaggtgcaaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 tgaattgagcaaggtgaaggacagtcatcgccccacctgggatgaaatgcaaggtgcaaa 614
Query: 425 gatcagaaaccaaatggttgggtctgaaggaacctctgggcaagtgtcagtccctcagtg 484
|||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||
Sbjct: 615 gatcagaaaccaaatggttgggtctgaagggacctctgggcaagtgaaagtccctcagtg 674
Query: 485 ggtttcaggttccagactgaaaaagcagtctagaagagtttctaaggtgctcctagtgct 544
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 675 ggtttcaggttccagactgaaaaagcagtcaagaagagtttctaaggtgctcctagtgct 734
Query: 545 tcgatgtggacccacctgtccatagaattgcagagagtagg 585
||||||||||||||||||||||||| |||||||||||||||
Sbjct: 735 tcgatgtggacccacctgtccataggattgcagagagtagg 775
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 585
Length of database: 985
Length adjustment: 10
Effective length of query: 575
Effective length of database: 975
Effective search space: 560625
Effective search space used: 560625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no339_i07.g1 MSMg01no339_i07.g1 CHROMAT_FILE:
MSMg01no339_i07.g1 PHD_FILE: MSMg01no339_i07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:28:22 2005
(496 letters)
>mm_chr8_130117522_130118417
Length = 896
Score = 951 bits (492), Expect = 0.0
Identities = 495/496 (99%)
Strand = Plus / Minus
Query: 1 tcatcaggactgaagcacatcctggccttttacctgttggtctctcccatctcaatcaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 tcatcaggactgaagcacatcctggccttttacctgttggtctctcccatctcaatcaga 553
Query: 61 gtttctctaaaaatttgtttccttctctcttagtcctccagacagtcaatgggggtggac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 gtttctctaaaaatttgtttccttctctcttagtcctccagacagtcaatgggggtggac 493
Query: 121 ctaccaccagggcttgaagttttaaagcccagaggggtgtttgcctctgtgagcagctct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 ctaccaccagggcttgaagttttaaagcccagaggggtgtttgcctctgtgagcagctct 433
Query: 181 tactgactcattcccaccctccccagaaagccttccaaacaaacctttcctgtctacaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 tactgactcattcccaccctccccagaaagccttccaaacaaacctttcctgtctacaac 373
Query: 241 ccctactcttttgccatctctctacccagatgtgccaccaagtttcacagatgcaggaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ccctactcttttgccatctctctacccagatgtgccaccaagtttcacagatgcaggaca 313
Query: 301 caggagtagcagccacagttttgttctgtggagatcactgaaatggccgcacatgggatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 caggagtagcagccacagttttgttctgtggagatcactgaaatggccgcacatgggatg 253
Query: 361 gatgagaagagaggtgaaaacagacaaacaggaatttgacaaatacttgacaggactggg 420
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 252 gatgagaagagaggtgaaaacagacaaacaggaattcgacaaatacttgacaggactggg 193
Query: 421 gatgtggctcagttggtagagagtgcttgcccaggatgcgtgaagtcctgggtttgatga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 gatgtggctcagttggtagagagtgcttgcccaggatgcgtgaagtcctgggtttgatga 133
Query: 481 ccagcaaccacagcta 496
||||||||||||||||
Sbjct: 132 ccagcaaccacagcta 117
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 496
Length of database: 896
Length adjustment: 10
Effective length of query: 486
Effective length of database: 886
Effective search space: 430596
Effective search space used: 430596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
