NCCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCATACGTTCTTTTCAGATGAAAGATTATAATTCTTGGTATGCCAAT
CATAAAATCTAGCAGCTATTTATCATATGCTTCAGGGGGGGTTTAGACAA
TGGGTCTATCATCACCAGGCCACCTCAGGATAGAGAGGCTGCCCTGAATC
TTCCACACTCTGGGGCTGACTTTGGATCTTCTCGGGTAGTTTAATGGCAG
GTACTTATTCCCCCCATGCAAAATATAACTGAGTGATTTCTTAAAATGTT
GCCGCAGGCAAAATATTCTGATCACATTGTTTTACAGTGACCCAGTTAGG
ATGACATATAACAAAGGAAGCTGCAAAATTTTATTATTGTCCCTGCAGAG
TCTACTCTCAGTATACTGATATTTGCTTTTCTTTAATTCCAACTGTCAGA
TACAAGTCTGCATGAATTCTGCTCTATTTTACTCATTTATAATTTATAAC
CTGCCTGCTTCTAAAAGTGATTTTTTTCAATGGCTTACTAAAAAAGATCT
ACATACNTATTTCCTACCCAGCNGAAATGGAAAACCACAGCCCTTGAATT
TATTAAAGATGCCAACCATTTTGGTTTGAAAAAAGAATTTCTTATGACAC
CCAATCCTAATTTATTTTTTTTCCCCCCTTAAAAAATTTTAAAACCCGCT
TTTTAAGGACCCTTAAGGATCCCCGGGGAAAAAATTTTTATTTTGGTTG

NNNNGCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGACAAAGGGCTAAATGAGG
TGCCTATTAGTATGCCAAAGGCAAGCTGGCCCCAGCCAAGCTCACTTGTA
CTATGGTTTCTCCCAGCTCTTCCAACCCTGCCCCCATCCTAAACCTCCTC
AGCCCCTGGGCCTAGCTTGCCTTTTTCCCCAGCTTCTCTTTCCTATATAA
CCCCGCCCTTTGGCCATGGGCTTTCTTAGTTCTCTTGGCTCTGTGGGAAT
GTGTGACCTTAGAGAACATAAGATGACCACTGAAAGACCTTGCTGGAATA
GCATGCTGGGGACCTCCCTTCCAGAATCACCCAGCAAAGCAAGCTTTACA
AGAAAGCCCAGACCACAAGGCAGGTGCAGATAATGACCAAGAATGCTTCA
GTTCCCTCTTCTGGTGACTAAGAACTCCCCTTACCCAGGGCCACCTATGT
TGCTTATGGAAGGTCATGAAAAGACACTTGCCTCTCAAAAAGGGAGAAGG
CTAATACCATTTCTAAAAGGAGGGGGGGATGAAAAGGCACCCTTGGGCCC
ACAAGGGGCTTAAAACAACATCTTGTTGTTATAAAGGCCTACCCTTAAAT
GGGTAAAAAGAGGGGGCTTATAAAAAAAAAGGTGGCCCCTCCCCCTTCGC
CGGGGGGACAAAAAAACCCTTTGTTTTTTGTTAAAACCCCGCCCCTGGGG
TTTGTGGA

Query= MSMg01no340_o23.b1 MSMg01no340_o23.b1 CHROMAT_FILE:
MSMg01no340_o23.b1 PHD_FILE: MSMg01no340_o23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:30:03 2005
         (457 letters)



>mm_chr8_16061850_16062705
          Length = 856

 Score =  853 bits (441), Expect = 0.0
 Identities = 450/453 (99%), Gaps = 1/453 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcatacgttcttttcagatgaaagattataattcttggtatgccaatcataaaatc 64
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatatgttcttttcagatgaaagattataattcttggtatgccaatcataaaatc 264

                                                                       
Query: 65  tagcagctatttatcatatgcttcagggggggtttagacaatgggtctatcatcaccagg 124
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 265 tagcagctatttatcatatgcttcagggggg-tttagacaatgggtctatcatcaccagg 323

                                                                       
Query: 125 ccacctcaggatagagaggctgccctgaatcttccacactctggggctgactttggatct 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ccacctcaggatagagaggctgccctgaatcttccacactctggggctgactttggatct 383

                                                                       
Query: 185 tctcgggtagtttaatggcaggtacttattccccccatgcaaaatataactgagtgattt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tctcgggtagtttaatggcaggtacttattccccccatgcaaaatataactgagtgattt 443

                                                                       
Query: 245 cttaaaatgttgccgcaggcaaaatattctgatcacattgttttacagtgacccagttag 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 cttaaaatgttgccgcaggcaaaatattctgatcacattgttttacagtgacccagttag 503

                                                                       
Query: 305 gatgacatataacaaaggaagctgcaaaattttattattgtccctgcagagtctactctc 364
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gatgacacataacaaaggaagctgcaaaattttattattgtccctgcagagtctactctc 563

                                                                       
Query: 365 agtatactgatatttgcttttctttaattccaactgtcagatacaagtctgcatgaattc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 agtatactgatatttgcttttctttaattccaactgtcagatacaagtctgcatgaattc 623

                                            
Query: 425 tgctctattttactcatttataatttataacct 457
           |||||||||||||||||||||||||||||||||
Sbjct: 624 tgctctattttactcatttataatttataacct 656


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 457
Length of database: 856
Length adjustment: 10
Effective length of query: 447
Effective length of database: 846
Effective search space:   378162
Effective search space used:   378162
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)