Query= MSMg01no342_b08.b1 MSMg01no342_b08.b1 CHROMAT_FILE:
MSMg01no342_b08.b1 PHD_FILE: MSMg01no342_b08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:30 2005
(389 letters)
>mm_chr8_113806691_113807479
Length = 789
Score = 710 bits (367), Expect = 0.0
Identities = 382/387 (98%)
Strand = Plus / Minus
Query: 1 agtttaagaagaacctaaatattacttaggtttatctcaatgataggacatttaccccaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 agtttaagaagaacctaaatattacttaggtttatctcaatgataggacatttaccccaa 368
Query: 61 acccagggcttcagacatagcaaccattaaagatttctttaccctaatatttactttctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 acccagggcttcagacatagcaaccattaaagatttctttaccctaatatttactttctt 308
Query: 121 tagttcagttacttgatactgagtttcagttactctgaaatttagttgagagtcgtgtcg 180
|||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 307 tagttcagttacttaatactgagtttcagttactctgaaattcagttgagagtcgtgtcg 248
Query: 181 ttttcatgattggcaagaaatcttttatccaatcaagaaatcattctagctgggtggtgg 240
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 ttttcgtgattggcaagaaatcttttatccaatcaagaaatcattctagctgggtggtgg 188
Query: 241 tggcactcacctttaatcctagcagttgggaagcagaggtaggcagatctctgtgagttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 tggcactcacctttaatcctagcagttgggaagcagaggtaggcagatctctgtgagttt 128
Query: 301 gaggccagcttggtcaatggagtaaattccagtatggccagggctacactgagaaactgt 360
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 127 gaggccagcttggtcaatggagtaaattccagtatggccagggctacacagagaaactgt 68
Query: 361 cttgggggtgccgggggtggggttggg 387
|||||||||||| ||||||||||||||
Sbjct: 67 cttgggggtgccaggggtggggttggg 41
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 389
Length of database: 789
Length adjustment: 9
Effective length of query: 380
Effective length of database: 780
Effective search space: 296400
Effective search space used: 296400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no342_b08.g1 MSMg01no342_b08.g1 CHROMAT_FILE:
MSMg01no342_b08.g1 PHD_FILE: MSMg01no342_b08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:31:30 2005
(484 letters)
>mm_chr8_113613670_113614551
Length = 882
Score = 433 bits (224), Expect = e-125
Identities = 240/246 (97%), Gaps = 2/246 (0%)
Strand = Plus / Plus
Query: 235 agtttctaattaaccctaacagttcactcaacgaagtgtaagggatacaggcagccaggt 294
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 435 agtttctaattaaccctaacagttcactcaacgaagtataagggatacaggcagccaggt 494
Query: 295 cacttcaatacacaggctccagcgccatctagtggtcagtctgaggacataagcagaacc 354
|||||||||||||||| |||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 495 cacttcaatacacaggttccagcgccacctagtggtcagcctgaggacataagcagaacc 554
Query: 355 aagtcccatctggtctgtggggcaattacagttaaatcagttaagattgggggaaaaaaa 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 aagtcccatctggtctgtggggcaattacagttaaatcagttaagattgggggaaaaaaa 614
Query: 415 aagatcttttaataaactttaaaacacactcacctgagtggaggtatcagagcccctgga 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 --gatcttttaataaactttaaaacacactcacctgagtggaggtatcagagcccctgga 672
Query: 475 tctgga 480
||||||
Sbjct: 673 tctgga 678
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 484
Length of database: 882
Length adjustment: 10
Effective length of query: 474
Effective length of database: 872
Effective search space: 413328
Effective search space used: 413328
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
