XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCTGTGTTGC
TAAGGGGATGTTAAGACATGTTCCCATATGTAACTGGAGATTTAAGTTTT
ATTTGGCCTTTGAGGAATGCCTGGGATCTCGATCTCTGGACTCAATACTA
TGTAGTGTTTCCCACAGATGGCCCACACTGCCTGAATTATCCAGATGCCT
TATGGTGATAGAAAATACATTCTAGAAGATTCTTGAGCCATCAGGGTGTC
TGGATCTTGCCTCTTCTCTCTACATGAGTCAGTGATTTGTTCTTGTCCTT
CCTCTGTTTTTGGGTTTTACAATGCTATATATTGTAAAAGTAACAATGTA
CAACTAAAATCAGTGAGAGAGAAGGAACATTACTTTTAAGGTACAGTCAA
CAAACCCAGAAATAAAGAGAAGTACAAAAAGCTTCTGCATAGCCAAGGGG
CTCTTCAAGGAGCTCTTAGGCTACATATGGAATTTAAGAGAACATTTCAA
ATTCTATGCCTGCTAATGGATTAACCTCCAACATCTGTAAGGAATTCTTG
TAACTCAATTGCAAAAACATTTGATAACCTGTTTGAGAAATAGTTTAAGA
ATCTATATTTCTAAATACACATTCCCATATATATGTGGATCTATATATCC
ACATGACTTAATGTTATTAGGAAATTATTCTTGAAACCCCCATTAGGTGA
GGCCTTAAAATTGGCCTGGGGAACATAAAATAATTTTTCN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXTTTCTTGCAAGGGGTTGTCCTGTGCACTATAGGATATTT
AGCAGCATCTCTTTATTCTTTCTTCTGGAGTCCAAGTAAACCTTCTCCTT
CCCTATGATGAGTCAGAATATCTCCAGTTATTTCCATCACCCACTAACCC
CTTGGGATTAGAGTAGAATATCTACTACTAATCAAGAACTGAGCATGAAG
AATGGAAGACATGATTTATATATATATATATGTGTGTGTGTGTGTGTGTG
TGTGTGTGTGTNNNNNTNNNNNNNNNTNNNNNNTTTTTTTTTTTTTTTTT
TTTNNTTTTTTTTTTTTTNNTTTTTTTNNTTTTTTTTTTTTTTTTTTNNT
NTTNNNNTTTNNNTNNNNNTTTTTNTTTTTTTTTTTTTTTTTTTTTTTTT
TNNNNNTNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
TNTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTTTTNTTTTTTTTTTTTTT
TTTTNTTTTTTTTTTTTTNTTTTTTTTTTTTTTTTNNTTTTTTTTTTTTT
TTTTTNNTTTTTNNTTTTTTTTTTTTTTTTTTNNTTTTTTTTTNTTTTTN
TNNNTTTTTNNTTTTNTTTTTTTTTNNTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTNTNNTTNTTNTNTTTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTNTTTTTTTTTTNCTTTTN

Query= MSMg01no342_h18.b1 MSMg01no342_h18.b1 CHROMAT_FILE:
MSMg01no342_h18.b1 PHD_FILE: MSMg01no342_h18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:32:01 2005
         (467 letters)



>mm_chr8_115859442_115860308
          Length = 867

 Score =  888 bits (459), Expect = 0.0
 Identities = 465/467 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   gatgttaagacatgttcccatatgtaactggagatttaagttttatttggcctttgagga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 gatgttaagacatgttcccatatgtaactggagatttaagttttatttggcctttgagga 472

                                                                       
Query: 61  atgcctgggatctcgatctctggactcaatactatgtagtgtttcccacagatggcccac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 atgcctgggatctcgatctctggactcaatactatgtagtgtttcccacagatggcccac 412

                                                                       
Query: 121 actgcctgaattatccagatgccttatggtgatagaaaatacattctagaagattcttga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 actgcctgaattatccagatgccttatggtgatagaaaatacattctagaagattcttga 352

                                                                       
Query: 181 gccatcagggtgtctggatcttgcctcttctctctacatgagtcagtgatttgttcttgt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 gccatcagggtgtctggatcttgcctcttctctctacatgagtcagtgatttgttcttgt 292

                                                                       
Query: 241 ccttcctctgtttttgggttttacaatgctatatattgtaaaagtaacaatgtacaacta 300
           |||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 ccttccacagtttttgggttttacaatgctatatattgtaaaagtaacaatgtacaacta 232

                                                                       
Query: 301 aaatcagtgagagagaaggaacattacttttaaggtacagtcaacaaacccagaaataaa 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 aaatcagtgagagagaaggaacattacttttaaggtacagtcaacaaacccagaaataaa 172

                                                                       
Query: 361 gagaagtacaaaaagcttctgcatagccaaggggctcttcaaggagctcttaggctacat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 gagaagtacaaaaagcttctgcatagccaaggggctcttcaaggagctcttaggctacat 112

                                                          
Query: 421 atggaatttaagagaacatttcaaattctatgcctgctaatggatta 467
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 atggaatttaagagaacatttcaaattctatgcctgctaatggatta 65


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 867
Length adjustment: 10
Effective length of query: 457
Effective length of database: 857
Effective search space:   391649
Effective search space used:   391649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)