Query= MSMg01no342_l16.b1 MSMg01no342_l16.b1 CHROMAT_FILE:
MSMg01no342_l16.b1 PHD_FILE: MSMg01no342_l16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:32:20 2005
(537 letters)
>mm_chr8_100868271_100869207
Length = 937
Score = 971 bits (502), Expect = 0.0
Identities = 520/526 (98%)
Strand = Plus / Minus
Query: 12 gaattcatgatatttaattcttccatgactatgttaaattcctcctttcaatactcatcc 71
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 gaattcatgatagttaattcttccatgactatgttaaattcctcctttcaatactcatcc 678
Query: 72 catattctggctttcttctttttcctcttaaccctttgacttgtttcttgtttgctaata 131
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 catattctggctttcttctctttcctcttaaccctttgacttgtttcttgtttgctaata 618
Query: 132 gctagttagtgagggataggatggtccctataaaactggactgatgtaccagtctccagt 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 gctagttagtgagggataggatggtccctataaaactggactgatgtaccagtctccagt 558
Query: 192 gagtgtcttattgagtctcctactagagactattcactcaatatttgaacctcaaatcac 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 gagtgtcttattgagtctcctactagagactattcactcaatatttgaacctcaaatcac 498
Query: 252 attttctgaaaattcttgtctatctcttcataagtaattttcaaattcttcagcattgcc 311
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 attttctgaaaattcttgtctatctcttcataagtaattttcaaattcttcagcattgcc 438
Query: 312 ttgaaattcatgcaaaatttcggaacccaaattttctttcttagaaaatgtcatgatgcc 371
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 437 ttgaaattcatgcaaaatttcggaactcaaattttctttcttagaaaatgtcatgatgcc 378
Query: 372 acttctacttgtcaataactggctaaggtattcaatcttaaatccaccataaattaaacc 431
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 acttctacttgtcaacaactggctaaggtattcaatcttaaatccaccataaattaaacc 318
Query: 432 tcctggaatattatgatggacagatgtcttagacttttgtaaggaaatgctacaggtcat 491
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 tcctggaatattatgatggacagatgtcttagacttttgtaaggaaatgctacaggtcat 258
Query: 492 agaggtataagtgatagcaaattatagaagtcatttgtttataatc 537
|||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 257 agaggtatttgtgatagcaaattatagaagtcatttgtttataatc 212
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 537
Length of database: 937
Length adjustment: 10
Effective length of query: 527
Effective length of database: 927
Effective search space: 488529
Effective search space used: 488529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no342_l16.g1 MSMg01no342_l16.g1 CHROMAT_FILE:
MSMg01no342_l16.g1 PHD_FILE: MSMg01no342_l16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:32:20 2005
(466 letters)
>mm_chr8_100686919_100687788
Length = 870
Score = 866 bits (448), Expect = 0.0
Identities = 463/470 (98%), Gaps = 4/470 (0%)
Strand = Plus / Plus
Query: 1 agggagctagaaaagggggttactggagggggtaggaagatcttaagcaaatgtgctatg 60
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agggagctagaaaagggggtcactggagggggtaggaagatcttaagcaaatgtgctatg 260
Query: 61 tagtaaataccaggtgatatgaatgagaaaaatggaattagggagtgagttttcggtgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagtaaataccaggtgatatgaatgagaaaaatggaattagggagtgagttttcggtgga 320
Query: 121 gagagatagataggcctgtagggaactggagggtgtaaatgatggaaagctaacattaaa 180
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 321 gagagatagataggcctgtagggacctggagggtgtaaatgatggaaagctaacattaaa 380
Query: 181 ttaaagatgtttgaaaacaatgctatttgggctgctagggagtggagcaattgcctggat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttaaagatgtttgaaaacaatgctatttgggctgctagggagtggagcaattgcctggat 440
Query: 241 acatacctagcagtaatgcctctgaatcacaatgatgacaataccagcaacatgtccacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acatacctagcagtaatgcctctgaatcacaatgatgacaataccagcaacatgtccacc 500
Query: 301 atgtgaaatagtagcacatttatattaggcataactaagaactgtttaattgtacctgag 360
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 501 atgtgaaatagtagcacatttatattgggcataactaagaactgtttaattgtacctgag 560
Query: 361 aaccaataaaaattatgtttgtatacacctgcccttatatgcacaggtatgtgtaggttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaccaataaaaattatgtttgtatacacctgcccttatatgcacaggtatgtgtaggttt 620
Query: 421 tacgtacattaattgttttttt----ctgctttggaacagatgaaaacaa 466
|||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 621 tacgtacattaattgtttttttttttctgctttggaacagatgaaaacaa 670
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 870
Length adjustment: 10
Effective length of query: 456
Effective length of database: 860
Effective search space: 392160
Effective search space used: 392160
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
