XXXXXXXXXXXXXXXXXXXXXXXXXTTCCGAGGATCCGCGGAATTCAATA
TGGCTTCAAGGCAGAGAGAAGAAAGATGAGAGGTTGGATTTAAGCTGAGA
GCTATTTGCAAGTCCTTATTAGTTGCTTAGGAACTTTAACATATGGATTC
ACTAATGACCCTGCCAAACTTGAAGTTTGGAAATGGCATAATCACATTTG
TAGTTTTAAAGAATCTTCTGGTTATAAGATGTAGATCAGAAAAAAATATA
CGTAGGTGTTGGAGAGTAAGTTAGGCAGCTGTTGAAACACCAAGATATCC
TAACGTTAGGTAGATATAGCATCAGTGATTTTTAACAGACAAATTGTTTA
ACAAAACCACATGTGGAGTGCACTGTATTGTGAAGACTTTAGCCTGTATA
TACAGTATAAAATATAAAGTTACAACACACGGCACACCAAGTCTTTAATA
CTTTTAAATTGATTAACTTTTTGATGCAGAGTGGTAAATTACAAAGATAC
AGGCAGTCTTGGAGGTTTGATATGTGTCTTTTCAGTGACAAAAATAGGAA
TTCTTTGGCGTTGGNCTGTTTACTTGGTCTTTAAAAGCTCTTGGAGACAC
ATCTAAAGTGAAAACATTCTACATAAGAATAGAACCCAAGAATTTTTGAT
GTAGTCCCAACCAGGGGACTGGAAACCATAAATAGGAGACCCCCCGAATG
GGAAAACCTTTGGGTGGAAAGTTAAATGG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXCTGATCTTTCCAAAACTTTTATCATGAATGGGTGTTGGAT
TTTTTCAAATGCTTTTTCCGCATCTAAGGAGATGATCATGTGTTTTTTGT
CTTTGAGTTTGTTTATATACTGGATTACGTTGATGGATTTCTGTATATTG
AACCATCCCTGCATCCCTGGGATGAAACCTACTTGGTCAGGATGGATGAT
TGTTTTGATGTGTTCTTTGATTCGGTTAGCCAGAACTTTATTGAGTATTT
TTGCATTGATATTCATAAGGGAAATTAGTCTGAATTTCTCTATCTTTGTT
GGTTCTTTTTGTGGTTTAGGTATCAGAGTAATTGTGGCTTCATAGAATGA
GTTGGGTAGAGTACCTTCTGTTTCTATTTTGTGGAATAGTTTCTGAAGAA
CTGGAATTAGATCTTCTTTGAAGGTTTGATAGAACTCTGCACTAAACCCA
TCTGGTCCTGTGTTTTTTTGGTTGGGAGACTATTAATGACTGCTTCTATT
TCTTTAGGGGATATAGGACTGTTGAGATCATTAACCTGATCTTGATTTAC
TTTGGTACCTGGAATCTGTCTAGAAACTTGTCCTTTTTATCAGGTTTTCG
GTTTTGTTGAGAAAAGCCTTTTTTAAAGATCGATGGGGTTTTGGTTTTTC
CCGATCTTTTGTTTGCTTCCCCTTTCTTT

Query= MSMg01no342_l23.b1 MSMg01no342_l23.b1 CHROMAT_FILE:
MSMg01no342_l23.b1 PHD_FILE: MSMg01no342_l23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:32:21 2005
         (484 letters)



>mm_chr8_54783644_54784530
          Length = 887

 Score =  851 bits (440), Expect = 0.0
 Identities = 470/482 (97%), Gaps = 5/482 (1%)
 Strand = Plus / Plus

                                                                       
Query: 7   gaattcaatatggcttcaaggcagagagaagaaagatga----gaggttggatttaagct 62
           ||||||||||||||   ||||||||||||||||||||||    |||||||||||||||||
Sbjct: 207 gaattcaatatggcaggaaggcagagagaagaaagatgaaagagaggttggatttaagct 266

                                                                       
Query: 63  gagagctatttgcaagtccttattagttgcttaggaactttaacatatggattcactaat 122
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 267 gagagctatttgcaagtccttattagttgcttaggagctttaacatatggattcactaat 326

                                                                       
Query: 123 gaccctgccaaacttgaagtttggaaatggcataatcacatttgtagttttaaagaatct 182
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 gaccctgccaaacttaaagtttggaaatggcataatcacatttgtagttttaaagaatct 386

                                                                       
Query: 183 tctggttataagatgtagatcagaaaaaaatatacgtaggtgttggagagtaagttaggc 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tctggttataagatgtagatcagaaaaaaatatacgtaggtgttggagagtaagttaggc 446

                                                                       
Query: 243 agctgttgaaacaccaagatatcctaacgttaggtagatatagcatcagtgatttttaac 302
           ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 447 agctgttgaaacaccaagatatcctaacgttaggtggatatagcatcagtgatttttaac 506

                                                                       
Query: 303 agacaaattgtttaacaaaaccacatgtggagtgcactgtattgtgaagactttagcctg 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 agacaaattgtttaacaaaaccacatgtggagtgcactgtattgtgaagactttagcctg 566

                                                                       
Query: 363 tatatacagtataaaatataaagttacaacacacggcacaccaagtctttaatactttta 422
           |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||
Sbjct: 567 tatatacagtataaaatataaagttacaacacacggtacaccaagtctt-aatactttta 625

                                                                       
Query: 423 aattgattaactttttgatgcagagtggtaaattacaaagatacaggcagtcttggaggt 482
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 aattgattaactttttgatgcagagtggtaaattacaaagatacaggcagtcttggaggt 685

             
Query: 483 tt 484
           ||
Sbjct: 686 tt 687


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 484
Length of database: 887
Length adjustment: 10
Effective length of query: 474
Effective length of database: 877
Effective search space:   415698
Effective search space used:   415698
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)