GGCCGCTATACGACTCACTAATCAAAANGGAGCCGCGGAATTCTCCTCTA
CAAATTCCTTGCTAGCTTTTATTTAAAAAATAACAGCCATTCTGTAGTGG
AATGATAACCTTTAAATAACTAATGGGGGCCACCAGTGAGGTGTAACTCA
CCTGTGCCAGGGATGGCTTCCTGTGGTCCTCATGAGAGAGCAGGAAGAGA
TGTATTCTGGCCTCCCACTCTGTGTCTTTGGATCTGGCCTAGAGCCAGAG
ACAATAACCATGAATTTCTGCTTAGATACAAGTGCAGTGTTTACAAGGTC
TTTATCATAGCACAGCACTTTGACATTATGTAACACAACTTTTGTTGTGT
TAATGGCCTCATTCCTATGCTGATAACATTTCTGTTGCTAGTGTTTTTAC
CCCCCCCNTTAAATTAATAGAAAGGGCATCTGTAAATTCTAATTTACTAC
AGCCGGATCAGTCCAATGGATGCATTGTTCTCAACATAAATTTCACCATG
GCTGTTGGATTGCACTGGTTGAGTAGATAATTAGGAAGCAACCATCACCA
TTACTCTGACATGGAATACATATGCATTCTGTTTTTAGCCATACTTATTC
TGACAGTTCACAGAGAATATTTATGTACAGTTTTCCTAGCCGCACACACA
GCGATGCTCTGTAGCTTTATACAAGGACACGTGAGCCTTTCTAGTTTACT
TCTTTATTTCACCA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXTGTTTCCAAATCCTGTACTGTCTTTAGCATTTCTATC
ACATTTACATTTGTGTTTTCCTGGGCATGGCTCAGACATTCATTTTCTTG
AAGTTCATTGAACTGTTTGTGCCTTCCTTAAACTCCTTGAATTTTTTAAA
ATACATTTTTAATAATTAAATTCTATGTTCTTGGGTTCATCTAGGTTTTG
CTTACTGGTGAACATTTCTACAGGACTGTTGAATTGGAGGCAGGTCGGGG
AGAATGTAGGGAGAAAGTGCCTTGAGCTTTCTTATTGTTTGTATTTTTGC
AATAAGATCTGGGCATGGGGAGTTATTTTGGTTAGTATATGNCTGATATA
CACACCAGGTAGGTATGCATGGGTCTAGTTGAGCCTAAAGGTTGGATATG
GTTCATGTATAATGCAGCCAGATAGATATAGATGTCTTGCATGGCATATA
GTCTGTAAGTTCTGGTCTATGTCTGGATTAAGGAAAGTCCTGTTACAAAT
CTTAATAATTGGAGACAATACAACCTGTCCACCCCCAAATTTTACTGTAT
CCCTGTTTTACAACAACACCCTTATCCTTTTTTCCAACACCCACAGCATT
TCTTATCCTACTTATCATTGTGTTAATACTAACTTTGTACTTTATTTTTT
ATTACCTTCCCCTTTTTCTTTN

Query= MSMg01no342_p11.b1 MSMg01no342_p11.b1 CHROMAT_FILE:
MSMg01no342_p11.b1 PHD_FILE: MSMg01no342_p11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:32:38 2005
         (361 letters)



>mm_chr8_25387058_25387819
          Length = 762

 Score =  636 bits (329), Expect = 0.0
 Identities = 351/361 (97%), Gaps = 7/361 (1%)
 Strand = Plus / Minus

                                                                       
Query: 3   ggaattctcctcta-caaattccttgctagcttttatttaaaaaataacagccattctgt 61
           |||||||||||||| | |||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 560 ggaattctcctctagcgaattccttgctagcttttatttaaaaaataacagccattccgt 501

                                                                       
Query: 62  agtggaatgataacctttaaataactaatgggggccaccagtgaggtgtaactcacctgt 121
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 agtggaatgataacctttaaataactaatgggggccaccagtgaggtgtaactcacctgt 441

                                                                       
Query: 122 gccagggatggcttcctgtggtcctcatgagagagcaggaagagatgtattctggcctcc 181
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gccagggatggcttcctgtggtcctcatgagagagcaggaagagatgtattctggcctcc 381

                                                                       
Query: 182 cactctgtgtctttggatctggcctagagccagagacaataaccatgaatttctgcttag 241
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cactctgtgtctttggatctggcctagagccagagacaataaccatgaatttctgcttag 321

                                                                       
Query: 242 atacaagtgcagtgtttacaaggtcttta---tcatagcacagcactttgacattatgta 298
           |||||||||||||||||||||||||   |    |||||||||||||||||||||||||||
Sbjct: 320 atacaagtgcagtgtttacaaggtc---agacgcatagcacagcactttgacattatgta 264

                                                                       
Query: 299 acacaacttttgttgtgttaatggcctcattcctatgctgataacatttctgttgctagt 358
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 acacaacttttgttgtgttaatggcctcattcctatgctgataacatttctgttgctagt 204

            
Query: 359 g 359
           |
Sbjct: 203 g 203


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 361
Length of database: 762
Length adjustment: 9
Effective length of query: 352
Effective length of database: 753
Effective search space:   265056
Effective search space used:   265056
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)