Query= MSMg01no343_f08.b1 MSMg01no343_f08.b1 CHROMAT_FILE:
MSMg01no343_f08.b1 PHD_FILE: MSMg01no343_f08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:33:08 2005
(392 letters)
>mm_chr8_11897692_11898482
Length = 791
Score = 721 bits (373), Expect = 0.0
Identities = 385/389 (98%), Gaps = 1/389 (0%)
Strand = Plus / Minus
Query: 4 ggaattctttcttggactgaaaaacccttgtgctccacttgctcatcccatggctcatcc 63
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 ggaattctttcatggactgaaaaacccttgtgctccacttgctcatcccatggctcatcc 697
Query: 64 tccacctgggtgaccatgagcatttttctgtcatatccttagctctgccttctccacact 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 tccacctgggtgaccatgagcatttttctgtcatatccttagctctgccttctccacact 637
Query: 124 gtggtgtggctggaatcctcctgcagggcctgcagactggcctctaggtcttagaaacag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 gtggtgtggctggaatcctcctgcagggcctgcagactggcctctaggtcttagaaacag 577
Query: 184 gctcaatgtgtgcacatctccgacacaactcatgcctcaacactcatttctttcactctg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 gctcaatgtgtgcacatctccgacacaactcatgcctcaacactcatttctttcactctg 517
Query: 244 gcgcagcatgttgctctctgctcctgatactgctgcaagtctcccaagggacacacaggc 303
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 gcacagcatgttgctctctgctcctgatactgctgcaagtctcccaagggacacacaggc 457
Query: 304 acagaggatttttaaaaaaatcaactatctagagtctcaccttatttaattaaccccccc 363
||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 acagaggatttttgaaaaa-tcaactatctagagtctcaccttatttaattaaccccccc 398
Query: 364 ttccctgcacacaactgacctgctggaga 392
|||||||||||||||||||||||||||||
Sbjct: 397 ttccctgcacacaactgacctgctggaga 369
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 392
Length of database: 791
Length adjustment: 9
Effective length of query: 383
Effective length of database: 782
Effective search space: 299506
Effective search space used: 299506
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no343_f08.g1 MSMg01no343_f08.g1 CHROMAT_FILE:
MSMg01no343_f08.g1 PHD_FILE: MSMg01no343_f08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:33:08 2005
(352 letters)
>mm_chr8_11722773_11723526
Length = 754
Score = 658 bits (340), Expect = 0.0
Identities = 350/354 (98%), Gaps = 2/354 (0%)
Strand = Plus / Plus
Query: 1 accaggggttgagaaccgatacagaagagatatttaaaagtcagaaaggacttagaaacc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 accaggggttgagaaccgatacagaagagatatttaaaagtcagaaaggacttagaaacc 260
Query: 61 cagtaggcagagcatggctgtagagtacagctccaggttttgtggttatggatccgagca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagtaggcagagcatggctgtagagtacagctccaggttttgtggttatggatccgagca 320
Query: 121 acggccacgaccacattatggtggtagctacatgagtgtatccacagaatacgtacccta 180
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 321 acggccacgaccacattatggttgtagctacatgagtgtatccacagaatacgtacccta 380
Query: 181 gctcacacacaacacaccatacacacaaacacacaccctataccataggggcacatgcac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gctcacacacaacacaccatacacacaaacacacaccctataccataggggcacatgcac 440
Query: 241 atatgccataccacagccttcccacacacaccgtgcatgtaccacacattgtacacacct 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 441 atatgccataccacagccttcccacacacaccgtgcatgtaccacacattgtacacactt 500
Query: 301 aacctttctctctctctctctctct--gctccccttacacacattgcctgtaaa 352
||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 501 aacctttctctctctctctctctctctgctccccttacacacattgcctgtaaa 554
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 352
Length of database: 754
Length adjustment: 9
Effective length of query: 343
Effective length of database: 745
Effective search space: 255535
Effective search space used: 255535
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
