Query= MSMg01no343_h21.b1 MSMg01no343_h21.b1 CHROMAT_FILE:
MSMg01no343_h21.b1 PHD_FILE: MSMg01no343_h21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:33:21 2005
(437 letters)
>mm_chr8_66361670_66362506
Length = 837
Score = 779 bits (403), Expect = 0.0
Identities = 425/433 (98%), Gaps = 2/433 (0%)
Strand = Plus / Minus
Query: 5 gaattcagctccatgtcactagatgcttctgtctattgccaatctttcataccaattcat 64
||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 gaattcaactccatgtcaatagatgcttctgtctattgccaatctttcataccaattcat 491
Query: 65 tactggttttctttatgtgtaggtattatttaataataatattataatcaatacatagca 124
|||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 490 tactggttttctttatatgtaggtattatttaatgataatattataatcaatacatagca 431
Query: 125 cactccttgtcattttcttagtattaaaacttttaccattagcctccaactgattctcta 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 cactccttgtcattttcttagtattaaaacttttaccattagcctccaactgattctcta 371
Query: 185 acaatgtactaaagactctcagaagacaaaagatccatatcatgttgtagttctagggca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 acaatgtactaaagactctcagaagacaaaagatccatatcatgttgtagttctagggca 311
Query: 245 gtgtttctctacatgtgggttatgactcctgtggcggtgaagtgatgttatcacaggggt 304
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gtgtttctcaacatgtgggttatgactcctgtggcggtgaagtgatgttatcacaggggt 251
Query: 305 tgcctaagactatcagaaaacgcatatatttacattacaattcataacagtagcaaattt 364
||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||
Sbjct: 250 tgcctaagactatcagaaaacacatat--ttacattacaattcataacagtagcaaattt 193
Query: 365 gcagttataaagtagcaacaaaaataattatatggttagggatcaccaccacatgaggaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 gcagttataaagtagcaacaaaaataattatatggttagggatcaccaccacatgaggaa 133
Query: 425 ctatattaaaagg 437
|||||||||||||
Sbjct: 132 ctatattaaaagg 120
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 837
Length adjustment: 9
Effective length of query: 428
Effective length of database: 828
Effective search space: 354384
Effective search space used: 354384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no343_h21.g1 MSMg01no343_h21.g1 CHROMAT_FILE:
MSMg01no343_h21.g1 PHD_FILE: MSMg01no343_h21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:33:21 2005
(381 letters)
>mm_chr8_66215595_66216372
Length = 778
Score = 605 bits (313), Expect = e-177
Identities = 363/385 (94%), Gaps = 13/385 (3%)
Strand = Plus / Plus
Query: 1 acttcagagatggttcacataaacaaagttttatggcctatttgtgaggaaagggagggc 60
|||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 201 acttcagagatgattcacataaacaaagttttatggtctatttgtgaggaaagggagggc 260
Query: 61 attgagattctctgggaagaacacatcttttttactatggtatgattctaaggtagacat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attgagattctctgggaagaacacatcttttttactatggtatgattctaaggtagacat 320
Query: 121 ggtgttctaaggctaaattgatgatgttgtgtttataatatagtgacttaaatttcaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggtgttctaaggctaaattgatgatgttgtgtttataatatagtgacttaaatttcaata 380
Query: 181 ttttacttaatacagattctattatgattcacaatacctggaaaatataaaatcattatt 240
||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 381 ttttacttaatacagattctattatgattcataatacctggaaaatataaaatcattat- 439
Query: 241 gtgtgttttatgcatgtttgtgtgtgtgtgtgtgcatatatatatatatatatatataat 300
|||||||||||||||||||||||||||||||| | | | | ||||||||||||||
Sbjct: 440 --gtgttttatgcatgtttgtgtgtgtgtgtgtg----tgtgtgtgtatatatatataat 493
Query: 301 catttatatatgaatacatgt--atatatatagaatcatgtatatatgtgtgtgt--ata 356
||||||||||||||||||||| |||||||||| |||||||||| ||||||||| |||
Sbjct: 494 catttatatatgaatacatgtgtatatatatag--tcatgtatatgtgtgtgtgtgtata 551
Query: 357 tatataaaatcatgtatatatgtat 381
|||||| ||||||||||||||||||
Sbjct: 552 tatatataatcatgtatatatgtat 576
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 73
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 381
Length of database: 778
Length adjustment: 9
Effective length of query: 372
Effective length of database: 769
Effective search space: 286068
Effective search space used: 286068
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
