Query= MSMg01no344_j15.b1 MSMg01no344_j15.b1 CHROMAT_FILE:
MSMg01no344_j15.b1 PHD_FILE: MSMg01no344_j15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:50 2005
(514 letters)
>mm_chr8_102749868_102750781
Length = 914
Score = 671 bits (347), Expect = 0.0
Identities = 371/379 (97%)
Strand = Plus / Minus
Query: 7 gaattcacctaatatcgaaacaaccatttaattttcttcccacgctaaaggaaaatgttt 66
||||||||||||||| |||||||| |||||||||||||||| | ||||||||||||||||
Sbjct: 379 gaattcacctaatattgaaacaactatttaattttcttccctcactaaaggaaaatgttt 320
Query: 67 taattacaaactttcatttatacaggtgatttcaaactatattttaatgacttacttcct 126
|||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 319 taattagaaactttcatttatgcaggtgatttcaaactatattttaatgacttacttcct 260
Query: 127 aagattaagcaaaatctattttatactttgtctcctacttacaatgttttcatttgaggt 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 aagattaagcaaaatctattttatactttgtctcctacttacaatgttttcatttgaggt 200
Query: 187 ttggactgatgttatgtattgtaattctaaatactggcccggcaaaatctgcctgtcccc 246
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 199 ttggactgatgctatgtattgtaattctaaatactggcccggcaaaatctgcctgtcccc 140
Query: 247 aatgaatagaccttgagggaagaggaaatcctcatggacaccaagctcttctatgtaacc 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 139 aatgaatagaccttgagggaagaggaaatcctcatggacaccaagctcttctatgtaacc 80
Query: 307 ttgctccttaatttaaaagttttggttgtataaaaatgcctacagcctgagtgagttaac 366
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 79 ttgctccttaatttaaaagttttggttgtacaaaaatgcctacagcctgagtgagttaac 20
Query: 367 tcagtcacaaaagaacaca 385
|||||||||||||||||||
Sbjct: 19 tcagtcacaaaagaacaca 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 914
Length adjustment: 10
Effective length of query: 504
Effective length of database: 904
Effective search space: 455616
Effective search space used: 455616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no344_j15.g1 MSMg01no344_j15.g1 CHROMAT_FILE:
MSMg01no344_j15.g1 PHD_FILE: MSMg01no344_j15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:50 2005
(561 letters)
>mm_chr8_102567336_102568297
Length = 962
Score = 1064 bits (550), Expect = 0.0
Identities = 559/562 (99%), Gaps = 1/562 (0%)
Strand = Plus / Plus
Query: 1 caaaagattctgcaaatgaagttgaacaaaagaaacaagcagatatcaaatggccacatg 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caaaagattctgcatatgaagttgaacaaaagaaacaagcagatatcaaatggccacatg 260
Query: 61 taaaaatgtctctggcactctgtttgcaattaaaatactgctaaatatacccagcacacg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taaaaatgtctctggcactctgtttgcaattaaaatactgctaaatatacccagcacacg 320
Query: 121 tctgcgtgcaattaaaaaaggaaaagtaattggtagaatttatttcctataaataggtat 180
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctgcatgcaattaaaaaaggaaaagtaattggtagaatttatttcctataaataggtat 380
Query: 181 tcatttagtgttttaattcctaagagcttacaattatagttcatctctaaaggaagtccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcatttagtgttttaattcctaagagcttacaattatagttcatctctaaaggaagtccc 440
Query: 241 agtttatataggttgtcacagttcataacatatgccctttaattaaatgtattagtactt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtttatataggttgtcacagttcataacatatgccctttaattaaatgtattagtactt 500
Query: 301 tataaaaaaaa-gaattcaaatatgaaagtaatccattttatgatccatttcttttaatt 359
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tataaaaaaaaagaattcaaatatgaaagtaatccattttatgatccatttcttttaatt 560
Query: 360 gtgcattttagctttcttttaaaatgcaggtataactatacacatatattttggtatcag 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtgcattttagctttcttttaaaatgcaggtataactatacacatatattttggtatcag 620
Query: 420 tatggaattttcattttgaccaagagctaagctttattatgtttattaaaatagtccttt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tatggaattttcattttgaccaagagctaagctttattatgtttattaaaatagtccttt 680
Query: 480 gtttgtaaggccagagcaaaatgaacaaaatactgagtggtggcgatgggcatataaaag 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gtttgtaaggccagagcaaaatgaacaaaatactgagtggtggcgatgggcatataaaag 740
Query: 540 aaaatatctggcacaatctatc 561
||||||||||||||||||||||
Sbjct: 741 aaaatatctggcacaatctatc 762
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 561
Length of database: 962
Length adjustment: 10
Effective length of query: 551
Effective length of database: 952
Effective search space: 524552
Effective search space used: 524552
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
