Query= MSMg01no346_m03.b1 MSMg01no346_m03.b1 CHROMAT_FILE:
MSMg01no346_m03.b1 PHD_FILE: MSMg01no346_m03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:37:32 2005
(174 letters)
>mm_chr8_112668735_112669308
Length = 574
Score = 333 bits (172), Expect = 5e-96
Identities = 172/172 (100%)
Strand = Plus / Minus
Query: 1 tgataatcgccttccgagtgcaaaccatcctgtcttcccgcttgccacctatgctcccca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 tgataatcgccttccgagtgcaaaccatcctgtcttcccgcttgccacctatgctcccca 313
Query: 61 ctccccaccccaaatattggctgttgtgaatggtggtgaatgaatggcacagtgtggata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 ctccccaccccaaatattggctgttgtgaatggtggtgaatgaatggcacagtgtggata 253
Query: 121 tagcccattctggagaagtgtcagccaaatggccctcatgaaagacttttaa 172
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 tagcccattctggagaagtgtcagccaaatggccctcatgaaagacttttaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 174
Length of database: 574
Length adjustment: 8
Effective length of query: 166
Effective length of database: 566
Effective search space: 93956
Effective search space used: 93956
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no346_m03.g1 MSMg01no346_m03.g1 CHROMAT_FILE:
MSMg01no346_m03.g1 PHD_FILE: MSMg01no346_m03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:37:32 2005
(391 letters)
>mm_chr8_112544842_112545625
Length = 784
Score = 698 bits (361), Expect = 0.0
Identities = 381/391 (97%), Gaps = 7/391 (1%)
Strand = Plus / Plus
Query: 1 tgaggggagatacccccaacgatcagtctgtgaggctttctaactacatcgtgggacttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgaggggagatacccccaacgatcagtctgtgaggctttctaactacatcgtgggacttg 260
Query: 61 gacaatctgatattttttttctctctacagcacagttatttgattgtacagtgtctgggc 120
|||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gacaatctgata-tttttctctctctacagcacagttatttgattgtacagtgtctgggc 319
Query: 121 cagggctggatatatgtaagtcacttacaattttctggcacaggcgagttagatcgcaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 cagggctggatatatgtaagtcacttacaattttctggcacaggcgagttagatcgcaag 379
Query: 181 cccccggtgggaatgagcctagagacttccaatgtttagcagccagggaaagagaacctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cccccggtgggaatgagcctagagacttccaatgtttagcagccagggaaagagaacctt 439
Query: 241 actgggaggaagcagaagggcggagagacgtctagagcaggcgtttaaagggaggcggag 300
|||||||||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 440 actgggaggaagcagaagggcggagacacgtctagagcaggcgtttaaa------cggag 493
Query: 301 aggcaagcaccagcctgcatcactcggagtgacggaacagcgagcaattgggtgttttgt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 aggcaagcaccagcctgcatcactcggagtgacggaacagcgagcaattgggtgttttgt 553
Query: 361 agttaatgatagctggatcagtggaagggaa 391
||||||||||||||||||||||||||||||
Sbjct: 554 ggttaatgatagctggatcagtggaagggaa 584
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 391
Length of database: 784
Length adjustment: 9
Effective length of query: 382
Effective length of database: 775
Effective search space: 296050
Effective search space used: 296050
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
