Query= MSMg01no347_c06.b1 MSMg01no347_c06.b1 CHROMAT_FILE:
MSMg01no347_c06.b1 PHD_FILE: MSMg01no347_c06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:38:01 2005
(448 letters)
>mm_chr8_127569379_127570226
Length = 848
Score = 820 bits (424), Expect = 0.0
Identities = 440/448 (98%), Gaps = 7/448 (1%)
Strand = Plus / Plus
Query: 5 gaattccaaatgttccc---caatcttgaaaactatgcatctgacaaaatcacacccctt 61
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaaatgt---catgcaatcttgaaaactatgcatctgacaaaatcacacccctt 261
Query: 62 ctagagcatgaggcaaatcacagtcagctgctgaggacgatctgaagcagccccacatcc 121
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 262 ctagagcatgaggcaaatcacagtcagctgctgaggacgatctaaagcagccccacatcc 321
Query: 122 cacacctgggattaaaacaaaaccacattcttacagcatttctgtgtttttaaaagaaaa 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 cacacctgggattaaaacaaaaccacattcttacagcatttctgtgtttttaaaagaaaa 381
Query: 182 ccaatcccaaaattgtcactacaatctcccagcaactcctgtaaggaaaggtcacagggg 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ccaatcccaaaattgtcactacaatctcccagcaactcctgtaaggaaaggtcacagggg 441
Query: 242 tggatgctgcctgatgcaggatttttttagttaacttctgcctccttgtggctacttctg 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 tggatgctgcctgatgcaggatttttttagttaacttctgcctccttgtggctacttctg 501
Query: 302 agaaaccctgtcccttttattcatttaaaaaatatttttatgtaagcaaaacaaattgta 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 agaaaccctgtcccttttattcatttaaaaaatatttttatgtaagcaaaacaaattgta 561
Query: 362 ttaaaatatttttatattagcaaaaaagaaaaaaaaa-ccttgtatttgttaattcatgt 420
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 562 ttaaaatatttttatattagcaaaaaagaaaaaaaaaaccttgtatttgttaattcatgt 621
Query: 421 tttcttttaaaatgttaagaggaaaaca 448
||||||||||||||||||||||||||||
Sbjct: 622 tttcttttaaaatgttaagaggaaaaca 649
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 848
Length adjustment: 10
Effective length of query: 438
Effective length of database: 838
Effective search space: 367044
Effective search space used: 367044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no347_c06.g1 MSMg01no347_c06.g1 CHROMAT_FILE:
MSMg01no347_c06.g1 PHD_FILE: MSMg01no347_c06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:38:01 2005
(473 letters)
>mm_chr8_127741857_127742729
Length = 873
Score = 859 bits (444), Expect = 0.0
Identities = 467/476 (98%), Gaps = 3/476 (0%)
Strand = Plus / Minus
Query: 1 ctaattgggtttaaaaaaaaaaaaagaaaga---aaaagaaaagagaaaaagcaaccagg 57
||||||||||||||||||||||||| ||| | ||||||||||||||||||||| ||||
Sbjct: 724 ctaattgggtttaaaaaaaaaaaaaaaaaaaaagaaaagaaaagagaaaaagcaagcagg 665
Query: 58 aattttcatgctggttttgattcgggattcaaaacagaaccgacaatgcaaattcctgca 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 664 aattttcatgctggttttgattcgggattcaaaacagaaccgacaatgcaaattcctgca 605
Query: 118 ttgctctgtgtgtaaaccggttcacagtccttaagaccccttcagcgactgcggttgcct 177
|||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||
Sbjct: 604 ttgctctgtgtgtaaaccagttcacagtccttaagaccccttcagcggctgcggttgcct 545
Query: 178 gcgcgtataaagcaaaagcagaccgcagcatgaattcttagctcggtatcccaaagaggc 237
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 gcgcgtagaaagcaaaagcagaccgcagcatgaattcttagctcggtatcccaaagaggc 485
Query: 238 ttttcttattctgagatgtgagaactgccctgtgttctcgccaagatgcttttaaacatt 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 ttttcttattctgagatgtgagaactgccctgtgttctcgccaagatgcttttaaacatt 425
Query: 298 ctaatctatttgctttgtcaaaggggagcctgggctaggagatgttggaacagcacctgc 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 ctaatctatttgctttgtcaaaggggagcctgggctaggagatgttggaacagcacctgc 365
Query: 358 tccttcccctggggatgctgggtgttttcctgctttctttgttaatgtattataaagatt 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 tccttcccctggggatgctgggtgttttcctgctttctttgttaatgtattataaagatt 305
Query: 418 gactggctccttcccttgccttcactgaattctaataaagcaagcagatataccca 473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 gactggctccttcccttgccttcactgaattctaataaagcaagcagatataccca 249
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 473
Length of database: 873
Length adjustment: 10
Effective length of query: 463
Effective length of database: 863
Effective search space: 399569
Effective search space used: 399569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
