Query= MSMg01no348_j19.b1 MSMg01no348_j19.b1 CHROMAT_FILE:
MSMg01no348_j19.b1 PHD_FILE: MSMg01no348_j19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:58 2005
(579 letters)
>mm_chr8_118864453_118865431
Length = 979
Score = 1038 bits (537), Expect = 0.0
Identities = 546/549 (99%), Gaps = 1/549 (0%)
Strand = Plus / Minus
Query: 32 gctgaactctctttctgatcacgaagagtcttagcaacatccaaatctgggttagcttga 91
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 979 gctgaactctctttctgatcacgaagagtcttagcaacatccaaatctgggttagcttga 920
Query: 92 aaacatcttcttccc-ggcctgagagatggtttgtcaggtaaagatccttgccaccaatg 150
||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 919 aaacatcttcttcccgggcctgagagatggcttgtcaggtaaagatccttgccaccaatg 860
Query: 151 ctggtgacctgaatttactccctggaacccacatggtggaaggagagaactgactcctgc 210
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 859 ctggtgacctgaatttactccctggaacccacatggtggaaggagagaactgactcctgc 800
Query: 211 aagttgtcctctgacctccatgggtgggatgttgagcacactcttaccctacctcagcac 270
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 799 aagttgtcctctgacctccatgggtgggatgttgagcacactcttaccctaccccagcac 740
Query: 271 acagtccatagttgtattaaaaaaaccaatctgcctgtctgtctgacacattgactaacc 330
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 acagtccatagttgtattaaaaaaaccaatctgcctgtctgtctgacacattgactaacc 680
Query: 331 gcaaggtagctcagctctttctttgtacacattcttgagaatacagtgtactgctattca 390
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 gcaaggtagctcagctctttctttgtacacattcttgagaatacagtgtactgctattca 620
Query: 391 ggatggaagtgtgttttccttattaagcactggtggatggatgctacagtgaggaagatg 450
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 ggatggaagtgtgttttccttattaagcactggtggatggatgctacagtgaggaagatg 560
Query: 451 tatcttttagcgtttacagcttaaacaccagcagtattctgccagagaaatgttaactga 510
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tatcttttagcgtttacagcttaaacaccagcagtattctgccagagaaatgttaactga 500
Query: 511 ggtctgtttctctctgtggaaaaaatatcacatttccctatcaacccaggttgggttcct 570
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 ggtctgtttctctctgtggaaaaaatatcacatttccctatcaacccaggttgggttcct 440
Query: 571 ccatctggc 579
|||||||||
Sbjct: 439 ccatctggc 431
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 579
Length of database: 979
Length adjustment: 10
Effective length of query: 569
Effective length of database: 969
Effective search space: 551361
Effective search space used: 551361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no348_j19.g1 MSMg01no348_j19.g1 CHROMAT_FILE:
MSMg01no348_j19.g1 PHD_FILE: MSMg01no348_j19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:39:58 2005
(307 letters)
>mm_chr8_118685384_118686090
Length = 707
Score = 507 bits (262), Expect = e-148
Identities = 292/304 (96%), Gaps = 6/304 (1%)
Strand = Plus / Plus
Query: 1 agtgttctacaagcaaattctgggtctgttgccagtgcatgataagttgtagtctaaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtgttctacaagcaaattctgggtctgttgccagtgcatgataagttgtagtctaaaaa 260
Query: 61 gacaggcgtgagaaaggaagtcagagtccagggcgttgactggatctctaatggaaaagg 120
|||||| ||||||||||||||||| || |||||||||| |||||||||||||||||||||
Sbjct: 261 gacaggtgtgagaaaggaagtcagggttcagggcgttgtctggatctctaatggaaaagg 320
Query: 121 agttcctgcagacatgggtccccgaaatgtgccttactccagagacattcttctggttat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agttcctgcagacatgggtccccgaaatgtgccttactccagagacattcttctggttat 380
Query: 181 aaagagagtggtatcagggtgcaggttaatttagaagccattaatagatgatagacttat 240
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 381 aaagagagtggtatcagggtgcaggttaatttagaagccattaacagatgatagacttat 440
Query: 241 gga----gatagatagatagatagatagatagatagatagatagatagatagatagatag 296
||| ||||||| |||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct: 441 ggatacagatagat-gatagatagatagatagatagatagatagataga-agaaagatag 498
Query: 297 atag 300
||||
Sbjct: 499 atag 502
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 77
Number of extensions: 30
Number of successful extensions: 30
Number of sequences better than 10.0: 1
Number of HSP's gapped: 26
Number of HSP's successfully gapped: 1
Length of query: 307
Length of database: 707
Length adjustment: 9
Effective length of query: 298
Effective length of database: 698
Effective search space: 208004
Effective search space used: 208004
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
