Query= MSMg01no349_a10.b1 MSMg01no349_a10.b1 CHROMAT_FILE:
MSMg01no349_a10.b1 PHD_FILE: MSMg01no349_a10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:40:31 2005
(696 letters)
>mm_chr8_68371730_68372822
Length = 1093
Score = 1239 bits (641), Expect = 0.0
Identities = 678/692 (97%), Gaps = 5/692 (0%)
Strand = Plus / Plus
Query: 5 gaattcatatgcaataacatagcaaataatatttgttcttttacaaagcaactttcaaca 64
||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 205 gaattcacatgcaataacatagcaaataatgtttgttcttttacaaagcaactttcaaca 264
Query: 65 gacattccgattctgcagtatgctgaaaacatcatccatagagcactgttttgttacaag 124
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 265 gacattccgattctgcagtatgctgaaaacatcatccatagagcactgtttggttacaag 324
Query: 125 aaaatatttgtttgaaattcaaaatgttacacagcattattgaggcttttgtaagtttaa 184
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 325 aaaatatttgtttgaaattcaaaatgttacacagcattattggggcttttgtaagtttaa 384
Query: 185 tggaatcttggaaaaa-tcattggtgttcctgaaagtttgagttatggtcattaaataga 243
|||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 385 tggaatcttggaaaaaatcattggt--tcctgaaagtttgagttatggtcattaaataga 442
Query: 244 attataaagctcatatcatttgatttcagaagaaaattatgttggttctatataataact 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 attataaagctcatatcatttgatttcagaagaaaattatgttggttctatataataact 502
Query: 304 aatacatgttggttcgatatataactaataacttatatattacaataactataatatggt 363
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 503 aatacatgttggttcgatatataactaataac--atatattacaataactataatatggt 560
Query: 364 tctatatataactaatataataacataatataattatgttggttctatataataactaat 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tctatatataactaatataataacataatataattatgttggttctatataataactaat 620
Query: 424 attgcttgtagtcaatgtaaggtttctagaggcttgtaggaggatgtaaccacttaggga 483
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 621 attgcttgtagtcaatgtaaggtttctagaggcttgtaggaggatgtgaccacttaggga 680
Query: 484 agacctaggcttgcagttaaggaacttgaaataaaacattatgtatcatttttggtcaat 543
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agacctaggcttgcagttgaggaacttgaaataaaacattatgtatcatttttggtcaat 740
Query: 544 ggcgtcttgaataaaattaaggctatgaaagatctacagccctagcttccttactttata 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ggcgtcttgaataaaattaaggctatgaaagatctacagccctagcttccttactttata 800
Query: 604 aaataatttataanataaagatcagaggataaataagttttagactgtattatatttcta 663
||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 801 aaataatttataaaataaagatcagaggataaataagttttagactatattatatttcta 860
Query: 664 aatgatgcaattctacttctatgatttatttt 695
|||||||||||||||||||| |||||||||||
Sbjct: 861 aatgatgcaattctacttctgtgatttatttt 892
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 696
Length of database: 1093
Length adjustment: 10
Effective length of query: 686
Effective length of database: 1083
Effective search space: 742938
Effective search space used: 742938
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no349_a10.g1 MSMg01no349_a10.g1 CHROMAT_FILE:
MSMg01no349_a10.g1 PHD_FILE: MSMg01no349_a10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:40:32 2005
(562 letters)
>mm_chr8_68417859_68418820
Length = 962
Score = 619 bits (320), Expect = 0.0
Identities = 335/340 (98%)
Strand = Plus / Minus
Query: 223 ggtctttatttatttagtctgtttatatggtttaaaaaatctactctaaaataaattctc 282
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 962 ggtctttatttatttagtctgtttatatggtttaaaaaatctactctaaaataacttctc 903
Query: 283 ttttcaaacttattctagtaggagaatgaatgaaagaaaaaatagctaaaatataatcaa 342
||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 902 ttttcgaacttattctagtaggagaatgaatgaaaggaaaaatagctaaaatataatcaa 843
Query: 343 gtttaggatctaatctgtctgaataggtactttgctgtcatgtggtaggtgaatcatgga 402
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 atttaggatctaatctgtctgaataggtactttgctgtcatgtggtaggtgaatcatgga 783
Query: 403 aatatggccatgaggactggaaactcgagccctgaactgtcacatagactgggccccatg 462
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 782 aatatggccatgaggactggaaactcgagccctgaactgtcacatagactgggccctatg 723
Query: 463 ttgggtgacagattttgattgatgttggtcataggtgctgcagtagagaaagaaggtcac 522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 ttgggtgacagattttgattgatgttggtcataggtgctgcagtagagaaagaaggtcac 663
Query: 523 caagattctaaacctacattttctgaaggagcaaagtgta 562
||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 caagattctaaacctacattttctgaaggagcaaagtgta 623
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 562
Length of database: 962
Length adjustment: 10
Effective length of query: 552
Effective length of database: 952
Effective search space: 525504
Effective search space used: 525504
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
