Query= MSMg01no349_e02.b1 MSMg01no349_e02.b1 CHROMAT_FILE:
MSMg01no349_e02.b1 PHD_FILE: MSMg01no349_e02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:40:49 2005
(595 letters)
>mm_chr8_58883346_58884340
Length = 995
Score = 681 bits (352), Expect = 0.0
Identities = 355/356 (99%)
Strand = Plus / Minus
Query: 5 gaattcctatatatgtactgccttaagatatgactcataaacagacagccttcacccttt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 gaattcctatatatgtactgccttaagatatgactcataaacagacagccttcacccttt 297
Query: 65 atatcaaaggcacaataaaaaagtatccaactctagagactagaaatagataccttagtc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 atatcaaaggcacaataaaaaagtatccaactctagagactagaaatagataccttagtc 237
Query: 125 tctactgttcttcaaagaatacccagcccagctgtggtgatttaaataaaaatggcccca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 tctactgttcttcaaagaatacccagcccagctgtggtgatttaaataaaaatggcccca 177
Query: 185 taagttcctgtatttgagtgttttgtcaccagggagtggaactcttgaatgaaagaatta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 taagttcctgtatttgagtgttttgtcaccagggagtggaactcttgaatgaaagaatta 117
Query: 245 caaggattaagaggtacagctctgctggaagaggtgtgacctttttagaggaagtgtgtc 304
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 caaggattaagaggtgcagctctgctggaagaggtgtgacctttttagaggaagtgtgtc 57
Query: 305 actgagggtgggctttcaggtttcaaaagccatgtgaggcccagtgactcttcctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56 actgagggtgggctttcaggtttcaaaagccatgtgaggcccagtgactcttcctg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 595
Length of database: 995
Length adjustment: 10
Effective length of query: 585
Effective length of database: 985
Effective search space: 576225
Effective search space used: 576225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no349_e02.g1 MSMg01no349_e02.g1 CHROMAT_FILE:
MSMg01no349_e02.g1 PHD_FILE: MSMg01no349_e02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:40:49 2005
(501 letters)
>mm_chr8_58673051_58673951
Length = 901
Score = 849 bits (439), Expect = 0.0
Identities = 476/501 (95%), Gaps = 20/501 (3%)
Strand = Plus / Plus
Query: 1 atgaccagacatgggtgtagcacagacagtgtttttatttggaagcctatggcttatgtg 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 221 atgaccagacatgggtgtagcacagacggtgtttttatttggaagcctatggcttatgtg 280
Query: 61 aggagcatcattccatgtgtagggtaactacaactaaacactcatggttattttcatatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 aggagcatcattccatgtgtagggtaactacaactaaacactcatggttattttcatatt 340
Query: 121 ttcatataaaactattgtagaaaattggatgtaatacacacacacacacacacacacaca 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 ttcatataaaactattgtagaaaattggatgtaatacacacacacacacacac------- 393
Query: 181 cacacacacacactataaaataggattttgtatggttttcctaacaatacttattgttag 240
|||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 394 -------------tataaaataggattttgtatggttttactaacaatacttattgttag 440
Query: 241 ttatccctaatttatttctttctccacaaaaaatattgtttcttctgatgagaaaataag 300
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 441 ttatccctaatttatttctttctccacaacaaatattgtttcttctgatgagaaaataag 500
Query: 301 cactggattgatgtgctaagctttggtgtgtgtcagaattttaccatcatatctctgtat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cactggattgatgtgctaagctttggtgtgtgtcagaattttaccatcatatctctgtat 560
Query: 361 ccttatcaagaaaatgtagaagtttaaatgagatgggagatgttcctctaagtcttagtc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccttatcaagaaaatgtagaagtttaaatgagatgggagatgttcctctaagtcttagtc 620
Query: 421 atgagaatactactgatggagaagcttaggaagctagacattgctgaaagaagtttgtca 480
|||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 621 atgataatactactgatggagaagcttaggaagcttgacattgctgaaagaagtttgtca 680
Query: 481 ctgcgagccacatttgaggtt 501
|||||||||||||||||||||
Sbjct: 681 ctgcgagccacatttgaggtt 701
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 53
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 501
Length of database: 901
Length adjustment: 10
Effective length of query: 491
Effective length of database: 891
Effective search space: 437481
Effective search space used: 437481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
