Query= MSMg01no349_o20.b1 MSMg01no349_o20.b1 CHROMAT_FILE:
MSMg01no349_o20.b1 PHD_FILE: MSMg01no349_o20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:41:41 2005
(501 letters)
>mm_chr8_128179299_128180199
Length = 901
Score = 880 bits (455), Expect = 0.0
Identities = 485/495 (97%), Gaps = 2/495 (0%)
Strand = Plus / Minus
Query: 8 ttccttggtgattaccagcaatgtggaagtgtaagatgaataaacgctttcctccccaat 67
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 ttccttggtgatgaacagcaatgtggaagtgtaagatgaataaacgctttcctccccaat 720
Query: 68 ttgtttcgtagtcatgatgttttatgcagtaatagaaaccctgactaagacaggtcattg 127
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 719 ttgtttcgtggtcatgatgttttatgcagtaatagaaaccctgactaagacaggtcattg 660
Query: 128 ttttcaacgtgagtttcttcttttgtagacacaagacactgcactggggtcgttggtgtt 187
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 659 ttttcaacgtgagtttcttcttttgtagatgcaagacactgcactggggtcgttggtgtt 600
Query: 188 taagaagtaacccatgcccatacctgtgtcatgcacatgcctctcatagagtgcagttgg 247
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 taagaagtaacccgtgcccatacctgtgtcatgcacatgcctctcatagagtgcagttgg 540
Query: 248 atatttcaccagtttctttacttagcaggatggctctctgcccgaccacctgtgggcttc 307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 atatttcaccagtttctttacttagcaggatggctctctgcccgaccacctgtgggcttc 480
Query: 308 catagtcataagagcatactgtgctccgtaatggacagagccaatgatttaccccaatga 367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 catagtcataagagcatactgtgctccgtaatggacagagccaatgatttaccccaatga 420
Query: 368 ggtcacctcccataaaatataatttc-gtagcctagaaattagtatttttcagtgaaaca 426
|||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||
Sbjct: 419 ggtcacctcccataaaatataa-ttcagtagcctagaaattagtatttttcagtgaaaca 361
Query: 427 gtcaatgttgacatttttaatattttctttacatttattcatatgtatgcatgcatgcat 486
|||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 360 gtcaatgttgacatttttcatattttcattacatttattcatatgtatgcatgcatgcat 301
Query: 487 gtatgtgtatatgta 501
|||||||||||||||
Sbjct: 300 gtatgtgtatatgta 286
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 501
Length of database: 901
Length adjustment: 10
Effective length of query: 491
Effective length of database: 891
Effective search space: 437481
Effective search space used: 437481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no349_o20.g1 MSMg01no349_o20.g1 CHROMAT_FILE:
MSMg01no349_o20.g1 PHD_FILE: MSMg01no349_o20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:41:41 2005
(518 letters)
>mm_chr8_128013653_128014569
Length = 917
Score = 917 bits (474), Expect = 0.0
Identities = 507/518 (97%), Gaps = 1/518 (0%)
Strand = Plus / Plus
Query: 1 tttcagcagggacttgggcatatccagcctatgaattaatgaggcaagagcagagaatgg 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 201 tttcagcagggacttgggcatatccagcctatgaattaacgaggcaagagcagagaatgg 260
Query: 61 tggggaacccacagagttatccaggtacacagtgcaaggagcgacacagaggacaacaca 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 261 tggggaacccacagagttatccagctacacagtgcaaggagcgacacagaggacaacaca 320
Query: 121 ggatggatgtaaccacaggacacttagtaagggggtaaagtttaaataaagctcgatgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggatggatgtaaccacaggacacttagtaagggggtaaagtttaaataaagctcgatgtc 380
Query: 181 agagggggaggaagcatgcccttggtgagagctgtccaggtgacgggtaccgaggaagct 240
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agagggg-aggaagcatgcccttggtgagagctgtccaggtgacgggtaccgaggaagct 439
Query: 241 gctctaaagcagaaaggtccacggcagtgcctgaagactgggatgatttcaacgtctcct 300
||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||
Sbjct: 440 gctctaaagcagaaaggcccacggcagtgcctgaagcctgggatgatttcaacgtctccc 499
Query: 301 actggctcatgataaacaacgggtctgtagctggtggtgctactatggagggccctagaa 360
|| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 acaggctcatgctaaacaacgggtctgtagctggtggtgctactatggagggccctagaa 559
Query: 361 actttacaaggtagaactttaccggaagagcaggtcactgaagttgtgtcaccagaactg 420
|||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||
Sbjct: 560 actttacaaggtagaactttgccggaagagcaggtcactgaagttgtgtcaccacaactg 619
Query: 421 atacccaatccctgaccgtctgtctatccctccctatgcactgtaaaatgaaaaaattct 480
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 620 atacccaatccctgaccgtctgtctagccctccctatgcactgtaaaatgaaaaaattct 679
Query: 481 ctgcacgacatgatcccatgtctaccccaagaacacag 518
||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ctgcacgacatgatcccatgtctaccccaagaacacag 717
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 518
Length of database: 917
Length adjustment: 10
Effective length of query: 508
Effective length of database: 907
Effective search space: 460756
Effective search space used: 460756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
