Query= MSMg01no356_e06.b1 MSMg01no356_e06.b1 CHROMAT_FILE:
MSMg01no356_e06.b1 PHD_FILE: MSMg01no356_e06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:49:56 2005
(509 letters)
>mm_chr8_41874842_41875751
Length = 910
Score = 787 bits (407), Expect = 0.0
Identities = 473/495 (95%), Gaps = 3/495 (0%)
Strand = Plus / Plus
Query: 17 gaattcactgtacctgcagacagcagctctttgattttatcttctgtc-ttttttggtta 75
||||||||| |||||| |||||||| |||||||||||||||||||||| |||||||||||
Sbjct: 217 gaattcactctacctggagacagcaactctttgattttatcttctgtctttttttggtta 276
Query: 76 tccaggtgttgatgtgctgtcagggctgctctgtttcaccctt-aagtccagctcttcca 134
|||||||| || ||||||||| |||||||||||| |||||||| ||||||||||||||||
Sbjct: 277 tccaggtggtgttgtgctgtcggggctgctctgtctcacccttaaagtccagctcttcca 336
Query: 135 tctctgcttcatagaacttttggcaggaatcttttaaagatgctacaaggtcacaagtct 194
||||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||
Sbjct: 337 tctctgcttcatagaacttgcggcaggaatctttaaaagatgctaaaaggtcacaagtct 396
Query: 195 tttctccaaagagcctgttggctgttctgagcaagtactgtgtgccagtcttgttcactt 254
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 397 tttctccaaagagcctgttggctgttctgagcaagtactgtgtgccagttttgttcactt 456
Query: 255 cggtgagaaggaactggaagctctggtggacatctctacctccattgccactgcatttat 314
||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 457 cggtgagaaggaactggaagccctggtggacatctctacctccattgccgctgcatttat 516
Query: 315 ccaaagaaagtgcctgaaccatctggctttcaatcgttccttttgatcccatgaagacca 374
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 517 ccaaagaaagtgcctgaaccatctggctttcaatcgttccttttgctcccatgaagacca 576
Query: 375 tagccagggctgaggagatgctcatggatgacaaaaatacatttttttgagttgtcttca 434
||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 577 tagccagggctgaggagatgctcatgggtgacaaaaatacatttttt-gagttgtcttca 635
Query: 435 cccactattttcaaaggtgccatttgattcctgtagaggatccataatggtgagacctag 494
||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 tccagtatttttaaaggtgccatttgattcctgtagaggatccataatggtgagacctag 695
Query: 495 attctcgatttccgg 509
|||||||||||||||
Sbjct: 696 attctcgatttccgg 710
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 509
Length of database: 910
Length adjustment: 10
Effective length of query: 499
Effective length of database: 900
Effective search space: 449100
Effective search space used: 449100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no356_e06.g1 MSMg01no356_e06.g1 CHROMAT_FILE:
MSMg01no356_e06.g1 PHD_FILE: MSMg01no356_e06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:49:57 2005
(298 letters)
>mm_chr8_41986863_41987560
Length = 698
Score = 576 bits (298), Expect = e-169
Identities = 298/298 (100%)
Strand = Plus / Minus
Query: 1 tacacatgcacatacatttatttctgcacccacaaatttatcatcagggttagcagctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 tacacatgcacatacatttatttctgcacccacaaatttatcatcagggttagcagctgc 370
Query: 61 atgacactctatgtggagatactttaatcccttatttatagacaattaagtgactcttgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 atgacactctatgtggagatactttaatcccttatttatagacaattaagtgactcttgg 310
Query: 121 ttttattttataaacagcactgatatcactggcattttataaatatccttctcattttat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 ttttattttataaacagcactgatatcactggcattttataaatatccttctcattttat 250
Query: 181 agcattttccttgcaaagagtcttctgtgaaccaagagtgtacgggtggattcctccctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 agcattttccttgcaaagagtcttctgtgaaccaagagtgtacgggtggattcctccctc 190
Query: 241 gaagcttggggaaccccatggaagatggagaggaagaactgtcggagccagaggggtt 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 gaagcttggggaaccccatggaagatggagaggaagaactgtcggagccagaggggtt 132
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 298
Length of database: 698
Length adjustment: 9
Effective length of query: 289
Effective length of database: 689
Effective search space: 199121
Effective search space used: 199121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
