Query= MSMg01no357_g22.b1 MSMg01no357_g22.b1 CHROMAT_FILE:
MSMg01no357_g22.b1 PHD_FILE: MSMg01no357_g22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:51:25 2005
(445 letters)
>mm_chr8_33653444_33654290
Length = 847
Score = 841 bits (435), Expect = 0.0
Identities = 441/443 (99%), Gaps = 2/443 (0%)
Strand = Plus / Plus
Query: 5 gaattca-tacattcccacctaca-cacagttctgactttttctctccctttcttctcta 62
||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaatacattcccacctacaacacagttctgactttttctctccctttcttctcta 264
Query: 63 tcacaaactgtgctgtggaatttttttcttgtctatgattttgggattttgaattcgctc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tcacaaactgtgctgtggaatttttttcttgtctatgattttgggattttgaattcgctc 324
Query: 123 tcctgcttatcgcagctgctcatcggaggcttatgaagatccaatccacatattagacac 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tcctgcttatcgcagctgctcatcggaggcttatgaagatccaatccacatattagacac 384
Query: 183 agcactcagtgtatcttaactctctgcatggcttaagtatgaatgtatttcttctactaa 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agcactcagtgtatcttaactctctgcatggcttaagtatgaatgtatttcttctactaa 444
Query: 243 tttttaagctgatctatttggttagaatttgttcaatctcttattttgtgacatttatct 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tttttaagctgatctatttggttagaatttgttcaatctcttattttgtgacatttatct 504
Query: 303 tatagattataatatcatctagaaaccattaatttaacattttctccagtaaaatcccat 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tatagattataatatcatctagaaaccattaatttaacattttctccagtaaaatcccat 564
Query: 363 ttacaacctacctttcatcctttctatctctctccctagcccctttcactccctatttct 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ttacaacctacctttcatcctttctatctctctccctagcccctttcactccctatttct 624
Query: 423 tttataacccttctctgataagc 445
|||||||||||||||||||||||
Sbjct: 625 tttataacccttctctgataagc 647
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 847
Length adjustment: 10
Effective length of query: 435
Effective length of database: 837
Effective search space: 364095
Effective search space used: 364095
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no357_g22.g1 MSMg01no357_g22.g1 CHROMAT_FILE:
MSMg01no357_g22.g1 PHD_FILE: MSMg01no357_g22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:51:25 2005
(382 letters)
>mm_chr8_33818454_33819235
Length = 782
Score = 739 bits (382), Expect = 0.0
Identities = 382/382 (100%)
Strand = Plus / Minus
Query: 1 cattaaccttggaggtaggcctgtaggaggtgagtgagtggctggaatctcaggtgaggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 cattaaccttggaggtaggcctgtaggaggtgagtgagtggctggaatctcaggtgaggc 523
Query: 61 taaatgacttgttccaccttctttgagagaagacttgatctcattgagggactctttctg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 taaatgacttgttccaccttctttgagagaagacttgatctcattgagggactctttctg 463
Query: 121 gtgccctgattaagataatggctgctatgctcagagaaagagttccacgacagggaggga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 gtgccctgattaagataatggctgctatgctcagagaaagagttccacgacagggaggga 403
Query: 181 gtggtgggaggagtggccagtccatgggtttggaagctccaggaagaggtgttcacatgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 gtggtgggaggagtggccagtccatgggtttggaagctccaggaagaggtgttcacatgg 343
Query: 241 tgcccttcaaccaggaagcagagcaagctagaccagatctatgagtagatataacacttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 tgcccttcaaccaggaagcagagcaagctagaccagatctatgagtagatataacacttt 283
Query: 301 taagcatcttcccctagtgacttacctctgtcaacctggccccattggcctctgcagcct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 taagcatcttcccctagtgacttacctctgtcaacctggccccattggcctctgcagcct 223
Query: 361 tcagaacagtactgtaagtcta 382
||||||||||||||||||||||
Sbjct: 222 tcagaacagtactgtaagtcta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 382
Length of database: 782
Length adjustment: 9
Effective length of query: 373
Effective length of database: 773
Effective search space: 288329
Effective search space used: 288329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
