Query= MSMg01no359_m18.b1 MSMg01no359_m18.b1 CHROMAT_FILE:
MSMg01no359_m18.b1 PHD_FILE: MSMg01no359_m18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:54:22 2005
(445 letters)
>mm_chr8_112920310_112921154
Length = 845
Score = 839 bits (434), Expect = 0.0
Identities = 440/442 (99%)
Strand = Plus / Plus
Query: 4 ggaattcctcactgtggcattctcttgggtgcctcacattttttctactaagtttctgga 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcctcactgtggcattctcttgggtgcctcacattttttctactaagtttctgga 263
Query: 64 tgtctttggacacttctcagtttccacttaacctaaggctccttgtgcacatgcacctct 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tgtctttggacacttctcagtttccacttaacctaaggctccttgtgcacatgcacctct 323
Query: 124 ttgcttgcttatggagaatatttaaggggtattctaagagtctccatccatagataaaat 183
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttgcttgcttatggagaacatttaaggggtattctaagagtctccatccatagataaaat 383
Query: 184 catgaccggtctccatgatagctaactcgctttaactaacctccagtgtcttgggtgtag 243
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 384 catgaccggtctccatgatagctaactcgctttaactaacttccagtgtcttgggtgtag 443
Query: 244 attaagggatattcctataaatcagggagaggaagctagtcacccttctaggtgtaaaaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 attaagggatattcctataaatcagggagaggaagctagtcacccttctaggtgtaaaaa 503
Query: 304 ggcagaattgtcaaggaacaaagaacaatgtctttgcaggcagaatagaacagcatgact 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ggcagaattgtcaaggaacaaagaacaatgtctttgcaggcagaatagaacagcatgact 563
Query: 364 gtagtgcaggttcatgcacatgaatggggcggtgtgggtgggaacagcaaatgcaggcca 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gtagtgcaggttcatgcacatgaatggggcggtgtgggtgggaacagcaaatgcaggcca 623
Query: 424 gctgtggaagactctgcatgcc 445
||||||||||||||||||||||
Sbjct: 624 gctgtggaagactctgcatgcc 645
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 445
Length of database: 845
Length adjustment: 10
Effective length of query: 435
Effective length of database: 835
Effective search space: 363225
Effective search space used: 363225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no359_m18.g1 MSMg01no359_m18.g1 CHROMAT_FILE:
MSMg01no359_m18.g1 PHD_FILE: MSMg01no359_m18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:54:22 2005
(502 letters)
>mm_chr8_113097709_113098611
Length = 903
Score = 714 bits (369), Expect = 0.0
Identities = 408/439 (92%), Gaps = 29/439 (6%)
Strand = Plus / Minus
Query: 93 ggcacagtgtttcatggaggagcaccagcacttggaagggtgagcgagatttaccatgag 152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 903 ggcacagtgtttcatggaggagcaccagcacttggaagggtgagcgagatttaccatgag 844
Query: 153 tttgaggccagccaaggctacataataagtttttaggcatgcctaggttacagagtgaaa 212
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 843 tttgaggccagccaaggctacataataggtttttaggcatgcctaggttacagagtgaaa 784
Query: 213 ccttctctcaaaataa----------------------------acacacacacacacac 244
|||||||||||||||| ||||||||||||||||
Sbjct: 783 ccttctctcaaaataaacacacacacacacatacacacacacacacacacacacacacac 724
Query: 245 acacacacacacacacacactaagagcaatagtaatagttaccactgttacttgtctcaa 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 acacacacacacacacacactaagagcaatagtaatagttaccactgttacttgtctcaa 664
Query: 305 gaagtattctcaactcttgagcaattttactaatccctacaatatcttctgagaagtaca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 gaagtattctcaactcttgagcaattttactaatccctacaatatcttctgagaagtaca 604
Query: 365 gagctatcactccccactttacagatt-aaaaaaaaaaacccgtaaattgcttaaagtct 423
||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 603 gagctatcattccccactttacagattaaaaaaaaaaaacccgtaaattgcttaaagtct 544
Query: 424 ttaacactagtgatctgggttaaagttcaagcagtatgtctccaaatgctacccacaacc 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 ttaacactagtgatctgggttaaagttcaagcagtatgtctccaaatgctacccacaacc 484
Query: 484 acctgatacacattattat 502
|||||||||||||||||||
Sbjct: 483 acctgatacacattattat 465
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 63
Number of extensions: 17
Number of successful extensions: 17
Number of sequences better than 10.0: 1
Number of HSP's gapped: 10
Number of HSP's successfully gapped: 1
Length of query: 502
Length of database: 903
Length adjustment: 10
Effective length of query: 492
Effective length of database: 893
Effective search space: 439356
Effective search space used: 439356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
