Query= MSMg01no364_j23.b1 MSMg01no364_j23.b1 CHROMAT_FILE:
MSMg01no364_j23.b1 PHD_FILE: MSMg01no364_j23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:00:48 2005
(420 letters)
>mm_chr19_29312546_29313365
Length = 820
Score = 619 bits (320), Expect = 0.0
Identities = 338/344 (98%), Gaps = 2/344 (0%)
Strand = Plus / Minus
Query: 78 agaggaacaggttaaagagacctgggggccatcagaagctggaagaagcaacaaaggaat 137
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 820 agaggaacaggttaaagagacctgggggccatcagaagctggaagaagcaacgaaggaat 761
Query: 138 cctctcaccccgaaacttcacacgaagcttgacccttgccaaccccttgggaagcctagt 197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 cctctcaccccgaaacttcacacgaagcttgacccttgccaaccccttgggaagcctagt 701
Query: 198 cttcagatttatgaaagaataagttcctactgatataagccatccaatgtggtagtctag 257
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 tttcagatttatgaaagaataagttcctactgatataagccatccaatgtggtagtctag 641
Query: 258 ggtagtctagaaaagtaatagactaggcagtgcttctcaaactgaagtccagacaagcct 317
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||
Sbjct: 640 ggtagtctagaaaagtaatagactaggtagtgcttctcaaactgaagtccagacaagtct 581
Query: 318 tggactttttaaattcccctgtctgacacaggaaatgctgcctgagaattgacagcga-t 376
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 580 tggactttttaaattcccctgtctgacacaggaaatgctgcctgagaattgacagcgact 521
Query: 377 ctgttagagggaagaaatcagtctccttattactctttcctgtt 420
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 -tgttagagggaagaaatcagtctccttattactctttcctgtt 478
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 420
Length of database: 820
Length adjustment: 9
Effective length of query: 411
Effective length of database: 811
Effective search space: 333321
Effective search space used: 333321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no364_j23.g1 MSMg01no364_j23.g1 CHROMAT_FILE:
MSMg01no364_j23.g1 PHD_FILE: MSMg01no364_j23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:00:48 2005
(403 letters)
>mm_chr8_58136677_58137479
Length = 803
Score = 748 bits (387), Expect = 0.0
Identities = 399/403 (99%)
Strand = Plus / Plus
Query: 1 agtgttatgtaagttagtaagtctatgccccttagacatacgccttctgtttgcaataat 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 agtgttatgtaagttagtaagtctatgccccttagacatatgccttctgtttgcaataat 260
Query: 61 aaaaaatatagttaaggtaagataaagtaatagataaggatagttttatgaagttcaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaaaaatatagttaaggtaagataaagtaatagataaggatagttttatgaagttcaagt 320
Query: 121 tagtatattagtttcattttcttaggagtttcttgagttgtttacaaaaaccagctctaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tagtatattagtttcattttcttaggagtttcttgagttgtttacaaaaaccagctctaa 380
Query: 181 attcacccttaaggaacatgaagtgtttataaagcaacttgtaaagtcaaattgaacaga 240
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attcaccctttaggaacatgaagtgtttataaagcaacttgtaaagtcaaattgaacaga 440
Query: 241 tttgactttagatttatcttctgtttcggggtgagggatattcctaaattgtgaaatgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttgactttagatttatcttctgtttcggggtgagggatattcctaaattgtgaaatgat 500
Query: 301 gagaggaaagaaaagagtaatggaggcagggcaaattaagacaaagaagaaactatagag 360
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 501 gagaggaaagaaaagagtaatggaggcggggcaaattaagacaaagaagaaactatagag 560
Query: 361 tgtgtttttccctattaaatttaaaagacatttctttgcatga 403
|||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 561 tgtgtttttccctattaaatttaaaagatatttctttgcatga 603
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 403
Length of database: 803
Length adjustment: 9
Effective length of query: 394
Effective length of database: 794
Effective search space: 312836
Effective search space used: 312836
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
