Query= MSMg01no365_g20.b1 MSMg01no365_g20.b1 CHROMAT_FILE:
MSMg01no365_g20.b1 PHD_FILE: MSMg01no365_g20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:01:55 2005
(513 letters)
>mm_chr8_129950922_129951832
Length = 911
Score = 926 bits (479), Expect = 0.0
Identities = 501/509 (98%), Gaps = 2/509 (0%)
Strand = Plus / Minus
Query: 5 gaattcacattttttcactgaaagcaaatggaagggaagggactcatgatacaggaaaac 64
||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 711 gaattcacattttaaaactgaaagcaaatggaagggaagggactcacgatacaggaaaac 652
Query: 65 tctattttggaaaaaaaacaaaaaacaaaaatcagaggttgcgtgagtagtgtgttttca 124
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 tctattttggaaaaaaaccaaaaaacaaaaatcagaggttgcgtgagtagtgtgttttca 592
Query: 125 actttaaacatttccttgttgtgtttagggcttacattgtgggacattcatcatctctgt 184
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 591 actttaaacatttccttgttgtgtttagggcttactttgtgggacattcatcatctctgt 532
Query: 185 atttaatattagatatccaaatcttgtaaaaaaaatcacctaagatgaacattgacaggg 244
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 531 atttaatattagatatccaaatcttgt--aaaaaatcacctaagatgaacattgacaggg 474
Query: 245 attttttggtgcaacttcctaagagtctggtctttttattgtatggcagctatttgtaag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 attttttggtgcaacttcctaagagtctggtctttttattgtatggcagctatttgtaag 414
Query: 305 aaatgatatgctaagtaatcctggagtataatttagggacaaaaccaactgtcaagaaac 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 aaatgatatgctaagtaatcctggagtataatttagggacaaaaccaactgtcaagaaac 354
Query: 365 agccagaaactacatctaatgaaatctttacagactgaagtaataagtattaaattaatc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 agccagaaactacatctaatgaaatctttacagactgaagtaataagtattaaattaatc 294
Query: 425 aacatagcttaattgaagctctatctgtaacatttttttcattagacttgttattaatga 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 aacatagcttaattgaagctctatctgtaacatttttttcattagacttgttattaatga 234
Query: 485 gcctttaaatgctacaactaacttgagct 513
|||||||||||||||||||||||||||||
Sbjct: 233 gcctttaaatgctacaactaacttgagct 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 911
Length adjustment: 10
Effective length of query: 503
Effective length of database: 901
Effective search space: 453203
Effective search space used: 453203
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no365_g20.g1 MSMg01no365_g20.g1 CHROMAT_FILE:
MSMg01no365_g20.g1 PHD_FILE: MSMg01no365_g20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:01:55 2005
(426 letters)
>mm_chr8_129800994_129801819
Length = 826
Score = 808 bits (418), Expect = 0.0
Identities = 424/426 (99%)
Strand = Plus / Plus
Query: 1 tttgtgtttatcggacattggttacagtttgaacttgggccagtatcttttacacaagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgtgtttatcggacattggttacagtttgaacttgggccagtatcttttacacaagaa 260
Query: 61 cccagcagttatgaacctgttcatagatgggtttagttttgtctatagtagagggttttg 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 261 cccagcagttatgaacctgttcatagatgggtttagttttgtctatagtagaggcttttg 320
Query: 121 attgctcactgagggtaaataaagatagattgtaggtatgctactctgcactttctttat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attgctcactgagggtaaataaagatagattgtaggtatgctactctgcactttctttat 380
Query: 181 aaatagaaataaccagaagcttctcatagtccaccccattgtagctaagacacacagtgc 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 381 aaatagaaataaccagaagcttctcatagtccaccccattgtagctaagacacatagtgc 440
Query: 241 atgtatttcacgagaacactagcaaagaagagaccttggcatcaaagttgtctgtggggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgtatttcacgagaacactagcaaagaagagaccttggcatcaaagttgtctgtggggg 500
Query: 301 ttttgggagagagggaattcaaacctcaaggaaagttagggacacagtctatgatgtgtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttttgggagagagggaattcaaacctcaaggaaagttagggacacagtctatgatgtgtc 560
Query: 361 atatgccccagggactgtcagtctcaggatatttgtttgaagaattccataaccaattct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atatgccccagggactgtcagtctcaggatatttgtttgaagaattccataaccaattct 620
Query: 421 ggacag 426
||||||
Sbjct: 621 ggacag 626
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 426
Length of database: 826
Length adjustment: 9
Effective length of query: 417
Effective length of database: 817
Effective search space: 340689
Effective search space used: 340689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
