XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CCATGAATACCGACAATAGCTTTCAGTTCTCAGTCTTGATTTTTCAGAGT
GTGTAATTGATGATAGGATAGCATTCAGACCAGGAATGCTTCCCTTTTTA
TTGCAAACATTGTTTGGATACTGCTACAAAGAATAATCAAATAGGTATGC
AAAGAAACTCATATAAAAATAGTCACCATGGAAGGGTCTCTGTAGATAGC
TCAGACTGGCTTTGAACTCCAATTCTGCCTCAGCTCCCTGTGCACTGGAG
TTATACTACTTTGGTAACTTTCTATATATTGGAATTCTGTACAACTATTT
AAAAATGATGTCTTAGAAAATTATCTGGAATCAAGAGGAAAAATGTTGGC
AACACACAAGTATCTTCGTAGTTCAGATCTTGGGCTGTTATAGCCTAACT
ACATAATAAATATTCTAAATATTTATTATTTCTATAGGTAGTCAAACGGA
AAAGGCAAGTTGTGAGACTAAATTCATTGTACCTATGTTTTTATTTTGTA
AACGATTATTGATAGCCACAATATAAATACATTACAATTGATGCATCGCG
TATTCCACATGCTTACTACGCTCGCCTGAGTGTCGATAGCAACTCGCCCT
TTTTCTCCCGTACTTATTGTCGTACTTTCCATAATTTACTTTCAATGGCT
CTTGACCTACCTTCCATTACATTCTCTCTTTTCCTTTG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXTGACAGAAAGCCAACCCTCTGTACCAGCAGCCCATGCTTGCTC
CCAGTGATTTACACCTAAGTACCTTCCAGTGACTGAGCCACCTGCGCACA
GGTCTTAGAGTCACGAGTGTAAAGGCAATGTTACTTCCATGTCTGTCCTC
AGCCCCAAGAGCCATCAGGCAGCTCCTTCTGAGTTATTTACTTCTAGAAC
CGTAAGAGCTGTCCAGGGAGAACCTAGTCGACTATTTCCAGAAGGTGCTT
CCGCCTCATCCACGTACTAAGACTCCTCCCTAGAAGGTGCTTAGCTTCCC
GTTCAGCAGCAAAACCCCAAGTCCCCAAGTTTGCCCACTTAGGAAGAGAA
GAACCTCTGTGGAGTATCCATTCTGTTGTCTCCCAGCCTGTTTCTCTCTG
CAGAACAGAATGCCAAGTTCCTTTCTTGGTTCATTAGTTCCATGGGGATG
GATGGAGCTTAACTCTACCCTTCCTTTGCACTTTTGTACCCCACATGTAT
ATCAGCGGTAACCACGTGAGGGTGAATTGAGACAGGATGCTTAACGGGAG
AGAGAGAGAAAGAGAGAAAGCTGATGTGGCATAAATCCTTCAGTCACCAC
CCATTTCTTCCTCCTTTGTGGCCTCTTGAGACTTCGTCTTTTCAGGAAAA
GAAGGCAGGACGGCAACTGGGTCACAAAA

Query= MSMg01no365_k08.b1 MSMg01no365_k08.b1 CHROMAT_FILE:
MSMg01no365_k08.b1 PHD_FILE: MSMg01no365_k08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:02:12 2005
         (429 letters)



>mm_chr8_93573009_93573837
          Length = 829

 Score =  822 bits (425), Expect = 0.0
 Identities = 428/429 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atagctttcagttctcagtcttgatttttcagagtgtgtaattgatgataggatagcatt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atagctttcagttctcagtcttgatttttcagagtgtgtaattgatgataggatagcatt 260

                                                                       
Query: 61  cagaccaggaatgcttccctttttattgcaaacattgtttggatactgctacaaagaata 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagaccaggaatgcttccctttttattgcaaacattgtttggatactgctacaaagaata 320

                                                                       
Query: 121 atcaaataggtatgcaaagaaactcatataaaaatagtcaccatggaagggtctctgtag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atcaaataggtatgcaaagaaactcatataaaaatagtcaccatggaagggtctctgtag 380

                                                                       
Query: 181 atagctcagactggctttgaactccaattctgcctcagctccctgtgcactggagttata 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atagctcagactggctttgaactccaattctgcctcagctccctgtgcactggagttata 440

                                                                       
Query: 241 ctactttggtaactttctatatattggaattctgtacaactatttaaaaatgatgtctta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctactttggtaactttctatatattggaattctgtacaactatttaaaaatgatgtctta 500

                                                                       
Query: 301 gaaaattatctggaatcaagaggaaaaatgttggcaacacacaagtatcttcgtagttca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaaaattatctggaatcaagaggaaaaatgttggcaacacacaagtatcttcgtagttca 560

                                                                       
Query: 361 gatcttgggctgttatagcctaactacataataaatattctaaatatttattatttctat 420
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gatcttgggctgttagagcctaactacataataaatattctaaatatttattatttctat 620

                    
Query: 421 aggtagtca 429
           |||||||||
Sbjct: 621 aggtagtca 629


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 829
Length adjustment: 9
Effective length of query: 420
Effective length of database: 820
Effective search space:   344400
Effective search space used:   344400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no365_k08.g1 MSMg01no365_k08.g1 CHROMAT_FILE:
MSMg01no365_k08.g1 PHD_FILE: MSMg01no365_k08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:02:12 2005
         (525 letters)



>mm_chr8_93718684_93719608
          Length = 925

 Score = 1007 bits (521), Expect = 0.0
 Identities = 524/525 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgacagaaagccaaccctctgtaccagcagcccatgcttgctcccagtgatttacaccta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 tgacagaaagccaaccctctgtaccagcagcccatgcttgctcccagtgatttacaccta 666

                                                                       
Query: 61  agtaccttccagtgactgagccacctgcgcacaggtcttagagtcacgagtgtaaaggca 120
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 665 agtaccttccagtgactgagccgcctgcgcacaggtcttagagtcacgagtgtaaaggca 606

                                                                       
Query: 121 atgttacttccatgtctgtcctcagccccaagagccatcaggcagctccttctgagttat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 atgttacttccatgtctgtcctcagccccaagagccatcaggcagctccttctgagttat 546

                                                                       
Query: 181 ttacttctagaaccgtaagagctgtccagggagaacctagtcgactatttccagaaggtg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 ttacttctagaaccgtaagagctgtccagggagaacctagtcgactatttccagaaggtg 486

                                                                       
Query: 241 cttccgcctcatccacgtactaagactcctccctagaaggtgcttagcttcccgttcagc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 cttccgcctcatccacgtactaagactcctccctagaaggtgcttagcttcccgttcagc 426

                                                                       
Query: 301 agcaaaaccccaagtccccaagtttgcccacttaggaagagaagaacctctgtggagtat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 agcaaaaccccaagtccccaagtttgcccacttaggaagagaagaacctctgtggagtat 366

                                                                       
Query: 361 ccattctgttgtctcccagcctgtttctctctgcagaacagaatgccaagttcctttctt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ccattctgttgtctcccagcctgtttctctctgcagaacagaatgccaagttcctttctt 306

                                                                       
Query: 421 ggttcattagttccatggggatggatggagcttaactctacccttcctttgcacttttgt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 ggttcattagttccatggggatggatggagcttaactctacccttcctttgcacttttgt 246

                                                        
Query: 481 accccacatgtatatcagcggtaaccacgtgagggtgaattgaga 525
           |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 accccacatgtatatcagcggtaaccacgtgagggtgaattgaga 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 525
Length of database: 925
Length adjustment: 10
Effective length of query: 515
Effective length of database: 915
Effective search space:   471225
Effective search space used:   471225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)