Query= MSMg01no366_c19.b1 MSMg01no366_c19.b1 CHROMAT_FILE:
MSMg01no366_c19.b1 PHD_FILE: MSMg01no366_c19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:02:56 2005
(480 letters)
>mm_chr8_24454561_24455440
Length = 880
Score = 859 bits (444), Expect = 0.0
Identities = 471/480 (98%)
Strand = Plus / Minus
Query: 1 ccctttattaacatatgaccatcaccctttttacatctctgtaatttgaaattcaagtct 60
|||||||||||| |||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct: 791 ccctttattaacgtatgaccatcacccttttcacatctctgtagtttgaaattcaagtct 732
Query: 61 actttaccagaaatgagaatagctgcttgcttgtggcttttgggtctctttcaggaggct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 actttaccagaaatgagaatagctgcttgcttgtggcttttgggtctctttcaggaggct 672
Query: 121 gctaaatgtacagctgtgttcagtttggcttcttgtcctggaccccacccaccttcttcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 gctaaatgtacagctgtgttcagtttggcttcttgtcctggaccccacccaccttcttcc 612
Query: 181 ctgacattttcaagtatcttgtcactgcctttgagatccaggatctcttcaactattctt 240
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 611 ctgacattttcaagtatcttgccactgcctttgagatccaggatctcttcaactattctt 552
Query: 241 tccttattctgattcatttcatatgcttcatttttctcccatcactggtcctgcactagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 tccttattctgattcatttcatatgcttcatttttctcccatcactggtcctgcactagt 492
Query: 301 gctgtgctgatctttgtattcaagacatggcattgcaatgcttgactcacagtgagtgtg 360
|||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||
Sbjct: 491 gctgtggtgatctttgtattcaagaaatggcattgcaatgcttgactcacagtgagtctg 432
Query: 361 ccttaaccaaacagtacactggagaacctggccagcagtgactctggatgacacgcctgg 420
|||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||
Sbjct: 431 ccttaaccaaacagtacactggagaacctggctagcagtgactctggatgacatgcctgg 372
Query: 421 gtcacccttatctgagggaggcacagagaggtgtagacactcattcacagttcattctaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 gtcacccttatctgagggaggcacagagaggtgtagacactcattcacagttcattctaa 312
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 480
Length of database: 880
Length adjustment: 10
Effective length of query: 470
Effective length of database: 870
Effective search space: 408900
Effective search space used: 408900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no366_c19.g1 MSMg01no366_c19.g1 CHROMAT_FILE:
MSMg01no366_c19.g1 PHD_FILE: MSMg01no366_c19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:02:56 2005
(480 letters)
>mm_chr8_24270300_24271179
Length = 880
Score = 866 bits (448), Expect = 0.0
Identities = 472/480 (98%), Gaps = 1/480 (0%)
Strand = Plus / Plus
Query: 1 cataaccctcctaagggacaagggacagggaagccagtggacggagctgtgccactctct 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 202 cataaccctcctaagggacaagggacagggaagccagtggacggagctgcgccactctct 261
Query: 61 gcacccttgggtgagctgctccaacttccgtgactcagttcactcatctgtcaatggaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gcacccttgggtgagctgctccaacttccgtgactcagttcactcatctgtcaatggaat 321
Query: 121 aataattatgtatgcataacattgtaataagattgaacaagattaaaataatgaacatgg 180
|||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 322 aataattatgtatgcata-ctttgtaataagattgaacaagattaaaataatgaacatgg 380
Query: 181 catgaaggagcacgcctttaatcccagcactcaagaggaagagacaggtgaggccaaagg 240
||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 catgagggagcaggcctttaatcccagcactcaagaggaagagacaggtgaggccaaagg 440
Query: 241 catcctggttgacttaacagttctaggctagccaggcctccatcaaaaagagaggcaaac 300
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cagcctggttgacttaacagttctaggctagccaggcctccatcaaaaagagaggcaaac 500
Query: 301 gctgagattccacatctggaagacagttagaccatgtcaaagaaaaaagaaaaagaaatg 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 501 gctgagattccacatctggaagacagttagaccatgtcaaagaaaaaagaaaaagaaaag 560
Query: 361 aaatgaaatgaatgtagctggcagataccaacaggaaataccattcttaaacactgagag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaatgaaatgaatgtagctggcagataccaacaggaaataccattcttaaacactgagag 620
Query: 421 ccttgcttccaacacatgtctcccacaagactgctgggtagaaacttgactcccacagga 480
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 621 ccttgcttccaacacatgtctcccacaagattgctgggtagaaacttgactcccacagga 680
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 480
Length of database: 880
Length adjustment: 10
Effective length of query: 470
Effective length of database: 870
Effective search space: 408900
Effective search space used: 408900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
