Query= MSMg01no366_g07.b1 MSMg01no366_g07.b1 CHROMAT_FILE:
MSMg01no366_g07.b1 PHD_FILE: MSMg01no366_g07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:14 2005
(428 letters)
>mm_chr8_93322747_93323574
Length = 828
Score = 791 bits (409), Expect = 0.0
Identities = 420/424 (99%)
Strand = Plus / Plus
Query: 5 gaattccctgcatgcctttatatacngttctgggggtgattcagggtttgacagcaggca 64
|||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccctgcatggctttatatacagttctgggggtgattcagggtttgacagcaggca 264
Query: 65 cctctcattggcttggactgagagtttggggaaaaccttatttgcatatgggaaggcttg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cctctcattggcttggactgagagtttggggaaaaccttatttgcatatgggaaggcttg 324
Query: 125 gtgctattcctaagtggctgatagccacgcctctcctgtgggagttggggtggtaactcc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gtgctattcctaagtggctgatagccacgcctctcctgtgggagttggggtggtaactcc 384
Query: 185 gacaggagcaagagtccaggagacatgagagaactccttccatcccatgtaagtgaatta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gacaggagcaagagtccaggagacatgagagaactccttccatcccatgtaagtgaatta 444
Query: 245 ccactaccgggtcccgggattcaagatctattcttgactggaaaccagggtgtctgtgtg 304
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 445 ccactaccgggtcccgggattcaagatctagccttgactggaaaccagggtgtctgtgtg 504
Query: 305 tgtagcccattgccccacataatagtacaagtgcgctactccaaatatgcccatttggca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgtagcccattgccccacataatagtacaagtgcgctactccaaatatgcccatttggca 564
Query: 365 agagtattattttgggaaacagcagagagctctgcaaacaagaacaaaagtgaccctgcc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 agagtattattttgggaaacagcagagagctctgcaaacaagaacaaaagtgaccctgcc 624
Query: 425 atga 428
||||
Sbjct: 625 atga 628
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 428
Length of database: 828
Length adjustment: 9
Effective length of query: 419
Effective length of database: 819
Effective search space: 343161
Effective search space used: 343161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no366_g07.g1 MSMg01no366_g07.g1 CHROMAT_FILE:
MSMg01no366_g07.g1 PHD_FILE: MSMg01no366_g07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:14 2005
(448 letters)
>mm_chr8_93487735_93488581
Length = 847
Score = 843 bits (436), Expect = 0.0
Identities = 442/444 (99%), Gaps = 1/444 (0%)
Strand = Plus / Minus
Query: 5 agaaatattcacaaaataaagtaacatagcaatatgaaacaacttaataaattctttatg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 agaaatattcacaaaataaagtaacatagcaatatgaaacaacttaataaattctttatg 788
Query: 65 tgatttttgatttttaaaaaatattaaaggaaccagtgcccttaatcccagcactcagga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 tgatttttgatttttaaaaaatattaaaggaaccagtgcccttaatcccagcactcagga 728
Query: 125 agcaaagtagctctctgcgagtgtgaggccggcttggtctacacagcaaccagccacatg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 agcaaagtagctctctgcgagtgtgaggccggcttggtctacacagcaaccagccacatg 668
Query: 185 gtgagacactctcccaacaacagtatttaaagtatctgttattaatgtcaaaaagctgta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 gtgagacactctcccaacaacagtatttaaagtatctgttattaatgtcaaaaagctgta 608
Query: 245 agattatattcaggcaaaaccaaccaaatatctcaaaatatccagtttctgacagaaaag 304
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 aga-gatattcaggcaaaaccaaccaaatatctcaaaatatccagtttctgacagaaaag 549
Query: 305 agcaatttggagtgatgttatgaaattaactgattcactagctctcagtccagtgtctat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 agcaatttggagtgatgttatgaaattaactgattcactagctctcagtccagtgtctat 489
Query: 365 ccctgatgtgtgtactttgattttgagtgtaatgtatgcactcatttacagccagcccat 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 ccctgatgtgtgtactttgattttgagtgtaatgtatgcactcatttacagccagcccat 429
Query: 425 tcattactgtacactgttaacagg 448
||||||||||||||||||||||||
Sbjct: 428 tcattactgtacactgttaacagg 405
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 847
Length adjustment: 10
Effective length of query: 438
Effective length of database: 837
Effective search space: 366606
Effective search space used: 366606
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
