NNNTTTCTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCTTTGTTCAGCTCTGAGCCCCATCTTTTAAGTGGGCTATTT
GATTTTCTGGAGTCCACCCTCTTGAGTTCTATATATATATTGGATATTAG
TCCCCTATCTGATTTAAGATAGGTAAAGATCCTTTCCCAATCTGTTGGTG
GTCTTCTTGTCTTATTGATGGTGTCTTTTGCCTTGCAGAAACTTTGCAGT
TTCATGAGGTCCCATTTGTCAATCCTCGATCTTAAAGCACAAGCCATTGC
TGTTCTGTTCAGGAATTTTTCCCCTGTGCCGATATCTTCAGGGCTTTTCC
CCACTTTCTCCTCTATAAGGTTCAGTGTCTCTGGTTTTCTGTGAAGATCT
TTGATCCACTTAGATTTGACCTTAGTACAAGGAGATAAGTATGGATCAGT
TCCCATTCTTCTACATGATAACAACCAGTTGTGCCAGCACCAATTGTTGA
AAATGCTGTCTTTCTTCCACTGGGATGGTTTAGCTCCCTTGTCGAATATC
AAGTGACCATAGGTGTGTGGGTTTATTTCTGGGTCTTTCAATCCATTCCA
TTGGCCACCTGGTTGGCTCTATACCAGGACCATGGGGGTTTTATTACAAT
TGCCCTGGAAAAAGTTTTTTGGCGGGGCGGGGATTTCCCCCTAAGCTCTT
TTTTCTTTATAAAAATATTTGCCGTCCTACTTTACAGTTTTTTCCTTTCC
ATAAAAATATCTATTTCCCCCCTCTTCTTTTTGAN

NNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTATGACTCTTGAGGTGATAAG
AATAGAGAAAGAAATGATGCTCAACATGGTGAAAACTATAAAACATAAAC
ATCAGATAAATGACGTCCAAAATCAATGTAAAGGACACTAGGTACGCTCT
TGGTGCTGATAAGGAACAAGAAGCCCACAGAAAATGATACAACAAGAATC
TTAACAGATGGTAAGTCAACTTAATCAGGCAAATTAAGGGATCATATGTT
AAAAACAAGAGAGTAGGTTAGTTGACATGTACTGTAATTACATAGGCTAT
ATTGCTTTCAATAAATGTTACAGGACAGATTAACGTTAATCATGCCAACT
ACATTTCTAAATCTGCTTTTCAGACATAATTAAAATCCTAAATTATTACT
GCTGCAAATTAACAATTTTAATGTAGTGCAGACATTGTAATCATCAGCAT
TTAGTTCTTTTCAAATGGTTTGTCTAATGCAAATTTAAACAATAGTCACC
TAAGTAAGTACAAGCGGAACCAGCCTTGCCTGAACAGTCTGTGAGAGACA
GACAGCTCCAGTGTGTATTCTCAGACAAAAGACAGTCAGCTCAAAAGTGA
ATGGGTGGAGTCTTTAATGGAGCATCGCGTAATCTCATTCAACACACTGA
GACCTTAACTACCGCTTACAGAAAACTTCAACCCTTCCAAAATGTAAAAA
AATGGAGTGCTCCCCAGGACCTGG

Query= MSMg01no366_i16.g1 MSMg01no366_i16.g1 CHROMAT_FILE:
MSMg01no366_i16.g1 PHD_FILE: MSMg01no366_i16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:25 2005
         (512 letters)



>mm_chr8_5998239_5999151
          Length = 913

 Score =  924 bits (478), Expect = 0.0
 Identities = 505/514 (98%), Gaps = 3/514 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tatgactcttgaggtgataagaatagagaaagaaatgatgctcaacatggtgaaaactat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 tatgactcttgaggtgataagaatagagaaagaaatgatgctcaacatggtgaaaactat 654

                                                                       
Query: 61  aaaacataaacatcagataaatgacgtcc-aaaatcaatgtaaaggacactaggtacgct 119
           ||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 653 aaaacataaccatcagataaatgacgtccaaaaatcaatgtaaaggacactaggtacact 594

                                                                       
Query: 120 cttggtgctgataaggaacaagaagcccacagaaaatgatacaacaagaatcttaacaga 179
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 593 cttggtgctgataaggaacaagaagcccacagaaaatgacacaacaagaatcttaacaga 534

                                                                       
Query: 180 tggtaagtcaacttaatcaggcaaattaagggatcatatgttaaaaacaagagagtaggt 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 tggtaagtcaacttaatcaggcaaattaagggatcatatgttaaaaacaagagagtaggt 474

                                                                       
Query: 240 tagttgacatgtactgtaattacataggctatattgctttcaataaatgttacaggacag 299
           ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 473 tagttgacatgcactgtaattacataggatatattgctttcaataaatgttacaggacag 414

                                                                       
Query: 300 attaacgttaatcatgccaactacatttctaaatctgcttttcagacataattaaaatcc 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 attaacgttaatcatgccaactacatttctaaatctgcttttcagacataattaaaatcc 354

                                                                       
Query: 360 taaattattactgctgcaaattaacaattttaatgtagtgcagacattgtaatcatcagc 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 taaattattactgctgcaaattaacaattttaatgtagtgcagacattgtaatcatcagc 294

                                                                       
Query: 420 atttagttcttttcaaatggtttgtctaatgcaaatttaaacaatagtcacctaagtaag 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 atttagttcttttcaaatggtttgtctaatgcaaatttaaacaatagtcacctaagtaag 234

                                             
Query: 480 tacaagcg-gaaccagccttgcctgaacagtctg 512
           |||||||| | | |||||||||||||||||||||
Sbjct: 233 tacaagcgcg-atcagccttgcctgaacagtctg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 512
Length of database: 913
Length adjustment: 10
Effective length of query: 502
Effective length of database: 903
Effective search space:   453306
Effective search space used:   453306
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)