Query= MSMg01no366_k08.b1 MSMg01no366_k08.b1 CHROMAT_FILE:
MSMg01no366_k08.b1 PHD_FILE: MSMg01no366_k08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:33 2005
(349 letters)
>mm_chr8_106156580_106157327
Length = 748
Score = 636 bits (329), Expect = 0.0
Identities = 344/349 (98%), Gaps = 1/349 (0%)
Strand = Plus / Plus
Query: 1 ttttcctcttgaaaatctctgacttaaaaaatcaaaaaaagcagggtccatataatccaa 60
|||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttcctcttcataatctctgacttaaaaaatcaaaaaaagcagggtccatataatccaa 260
Query: 61 gtgagggttactttgcaaaggccataaggtcataacgggaggtagctgctgtcaacactt 120
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgagggttactttgcaaaggtcataaggtcataacgggaggtagctgctgtcaacactt 320
Query: 121 tcagttgataggcatggaccatgatgcacaaaccagatgtggcaaagatctatctcagga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcagttgataggcatggaccatgatgcacaaaccagatgtggcaaagatctatctcagga 380
Query: 181 gtcagggagtctcttccagatccagaatgcaggtccatctcagaacagcgggaccacgag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtcagggagtctcttccagatccagaatgcaggtccatctcagaacagcgggaccacgag 440
Query: 241 aacaaggttatactcagtatggaagggacagggggcaggtgctggcttttcccagcagcc 300
|||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aacaaggttagac-cagtatggaagggacagggggcaggtgctggcttttcccagcagcc 499
Query: 301 tctcaggcctgtgttagttgacattgacatttattttgttcccgctctt 349
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tctcaggcctgtgttagttgacattgacatttattttgttcccgctctt 548
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 349
Length of database: 748
Length adjustment: 9
Effective length of query: 340
Effective length of database: 739
Effective search space: 251260
Effective search space used: 251260
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no366_k08.g1 MSMg01no366_k08.g1 CHROMAT_FILE:
MSMg01no366_k08.g1 PHD_FILE: MSMg01no366_k08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:03:33 2005
(246 letters)
>mm_chr8_106333012_106333657
Length = 646
Score = 431 bits (223), Expect = e-125
Identities = 244/259 (94%), Gaps = 13/259 (5%)
Strand = Plus / Minus
Query: 1 catcactggttgctttggtgtaagtcgatgcttgtgtgtagtggagtaaagctacttcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 catcactggttgctttggtgtaagtcgatgcttgtgtgtagtggagtaaagctacttcct 282
Query: 61 caggaggtgaaacaggagaagccactaggggtccaacatgccttttaaaaacatgcacat 120
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 281 caggaggtgaaacaggagaagccactaggggcccaacatgccttttaaaaacatgcacat 222
Query: 121 atccccaatgacctgaagtg-------------ccgccttttaaagggccatctacctcc 167
|||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 221 atccccaatgacctgaagtgctcccacaaggcaccgccttttaaagggccatctacctcc 162
Query: 168 taggatcaccagtgtggagatctggtctttcacacagaccctttggtctatagatccaac 227
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 161 taggatcaccagggtggagatctggtctttcacacagaccctttggtctatagatccaac 102
Query: 228 ctgtgagacttggtctctc 246
|||||||||||||||||||
Sbjct: 101 ctgtgagacttggtctctc 83
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space: 150969
Effective search space used: 150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
