NTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCTTTGTTCAGCTCTGAGCCCCATTTTTTAATGGGGTTATTTGATT
TTCTGGAGTCCACCTTCTTGAGTTCTTTATATATATTGAATATTAGTCCC
CTATCCGATTTGGGTTAGGTAAAGATCCTTTCCCAATCTGTTGGTGGCCT
TTTTGTCTTATTGACGGTGTCTTTTGCTTTGCAGAAGCTTTGCAATTTTA
TGAGGTCCCACTTATTGATTCTTGATCTTACAGCACAAGCCATTGCTGTT
CTATTCAGGAATTTTTCCCCTGTACCCATATCTTCGAGGCTTTTCCCTAC
TTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGGAGTTCCTTAA
TCCACTTAGATTTGACCTTAGTACAAGGAGATAGAAATAGATCAATTCGC
ATTCTTCTACATGATAACCGCCAGTTTGTGCCAGCACATTTTGGTGAAAA
TGCTGCCTTTTTTCCACTGGATGAATTTACCTCCCCTTGGCCAAAAAACA
AGGGGCCCAAAGGGGGGGGGGAATCCCTCCCTCGGGCCTTTTAATCTGGG
CCCCATGGGGCCAAATTGGGGGGGCCCCAAAATCCCGAAACCATGGGGTT
TTTTGAACCCAAATGGGCCTTGGTAGTAAACAGTTTTTTTGCCCCCCGCC
GTTGGGTATTTTTT

TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXCCAAAGGAGTTAGCAGGCTAGTTTCTGCCATTG
AATAACCTTTACCTTTCCTTTCTCCAGTCATACTGAGCTAGTGGGTAACT
TTTAACTGTTAAAATTATCAGGAAGGCAAGGATGTAAAAATGAAATGTGT
AATAAAGATCACTTGGTTCAGGTCATTCACTGGACACTCACTTACACTGA
GGGTTGACTCAGACCCTTTCCCTAAAACTCACCAGATTTACTATAAGTGT
CTCGGGAAGACTTGGCATCTCTTGAGTCTCTTCTCTAGATTCTGAACCAT
TAACAAGGCATTAGATTAGCTGAGCCTATGTCTCTGTCTCTGGTCCATAT
TCTTACCATATTCTTACCTTCAAGGTGGGGCACGTGTCCTGCCTTCAGCT
TCCACTTTAGTGAAGATGCCTTCTCATCTTCCTGGAGCACACTCCAGGTG
GGAAGTTTGTTTGGCTATGGAGAGAGCCAAGCAAGCTGGGATGTCTCTAT
TACAATTGAACTAAAGATTTGGAGGTAAAGCTATGTATAAGATAATTACT
TTGCTTCCTAATAAGCATGGCTTTGTGTTATTTCAATCCTCCAACCTACT
TGAAAACAAACCCTGGAAGAAAATCCTAATGCTTCAGGAAAAGAATCCCT
ATCCTTATGGATTGCCAAAGCTTTTTATCATATTTCCAGAAGATTCTCC

Query= MSMg01no368_a08.g1 MSMg01no368_a08.g1 CHROMAT_FILE:
MSMg01no368_a08.g1 PHD_FILE: MSMg01no368_a08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:21 2005
         (548 letters)



>mm_chr8_69966129_69967076
          Length = 948

 Score =  942 bits (487), Expect = 0.0
 Identities = 536/559 (95%), Gaps = 11/559 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   ccaaaggagttagcaggctagtttctgccattgaataacctttacctttcctttctccag 60
           ||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||
Sbjct: 190 ccaaaggagttagcaggctggtttctgccattgaataacctttatctttcctttctccag 249

                                                                       
Query: 61  tcatactgagctagtgggtaacttttaactgttaaaattatcaggaaggcaaggatgtaa 120
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 250 tcatactgagctagtgggtaacttttaactgttaaaattatcaggaaggcaaggatataa 309

                                                                       
Query: 121 aaatgaaatgtgtaataaagatcacttggttcaggtcattcactggacactcacttacac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 aaatgaaatgtgtaataaagatcacttggttcaggtcattcactggacactcacttacac 369

                                                                       
Query: 181 tgagggttgactcagaccctttccctaaaactcaccagatttactataagtgtctcggga 240
           |||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||||
Sbjct: 370 tgagggttgactcagaccctttccctaaaattcatcagatttactataagtgcctcggga 429

                                                                       
Query: 241 agacttggcatctcttgagtctcttctctagattctgaaccattaacaaggcattagatt 300
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 430 agacttggcatctcttgagtctcttctctagattctgaaccattaacaagacattagatt 489

                                                                       
Query: 301 agctgagcctatgtctctgtctctggtccatattcttaccatattcttacc--------- 351
           |||||||||||||||||||||||||||||||||||||||||||||||||||         
Sbjct: 490 agctgagcctatgtctctgtctctggtccatattcttaccatattcttaccatattctta 549

                                                                       
Query: 352 --ttcaaggtggggcacgtgtcctgccttcagcttccactttagtgaagatgccttctca 409
             ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 550 ctttcaaggtggggcacgtgtcctgccttcagcttccactttagtgaagatgccttccca 609

                                                                       
Query: 410 tcttcctggagcacactccaggtgggaagtttgtttggctatggagagagccaagcaagc 469
           ||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||
Sbjct: 610 tcttcctggagaacactccaggtgggaaggttgtttagctatggagagagccaagcaagc 669

                                                                       
Query: 470 tgggatgtctctattacaattgaactaaagatttggaggtaaagctatgtataagataat 529
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 670 tgggatgtctctattacaattgaactaaagatttggaggtaaagctatgtataagatgat 729

                              
Query: 530 tactttgcttcctaataag 548
           |||||||||||||||||||
Sbjct: 730 tactttgcttcctaataag 748


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 548
Length of database: 948
Length adjustment: 10
Effective length of query: 538
Effective length of database: 938
Effective search space:   504644
Effective search space used:   504644
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)