XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
TTGGGGTTCCTGGGGTGGCCAGTCTAGCTTAACTGGTGAGTTACAAGCCA
ATGAGAGACCCTCTCTCAAAGGAGGTAGACAGGGTTCCTGACTCTAACAC
CTGAGACTCCCTCCAACTGATGTATATAACATATATGTGTACACGTGAAG
TTCACATGTACACACACAACACTATCAAAACTACCATGACAATAGATGTT
ATTCTAGTCTAGTTAAACAGTTGGCCCTTCAAGTCTTGGAGCTGAAGGAC
ATCCTCTTTTTCTTAAAAACAAAAAGAAGACATTTACAAGTCCAAGAATG
ATTTTAAAAGAGAAAGCAGCCTCCTGGCTTCTTTGTAAGACTTGAAGCAC
TAAACACTATAAATGCACAAGCCTGGCACTCGCCCCAGAGTTCTCCAGCA
GGCTTGCAGAAACTTGGATCCTGCAGCTGGAGGCCAGGGCACCCACTCCC
GCTTCTCCTGGCTGAGATACTTGCCAGTGCGTATAACTGAACACTCAACT
TTCATCTGTAAGAAATCCACTCTGCTCGCCACTCTGAAGCCCGTCTTGCT
TTTGGGTGGTGACTCTATTTTCTGTGGCTAGCCATTGCTATTTAAGGACT
GGCTAGACATGGCTTCCACAGTGAGTCATCGAGACAGTTTTGTTTCATCT
TCTCCCAGAAACTCACATGAAGATAGAAACATCTGCCCCGCCTTTTTN

GCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXTTTCTGGGACTCCTTCCTCTCTGAACGACA
TAGTATGTGCACCTATTATAAAAGGAAGATGTCCCTACACTGGAATCCAA
GGTGATGGGTCAAGGCAGAACTATTGACAAAATAAAAGGTGGATAGGCTA
CAATTCAATCAAAACACTATGGATACATTCGCACAGGCTCTGGAATGATT
GACAGGCCTCTTCTGTTTCCTAGTGATTGTTCATAGATAATGTACTAAGA
TTTTTCCATTTATTTTGGAAGGCACGATCTGTCAGATGGACCTCTCATGA
CAATTTAATAAAATGCGTATACTGTGGTCACTCTGATCCTCATGGAACTA
AAATACAAATCTGACAGAAAGAAGTCTCACCAGCCTCAAGTTAAAGTGGG
CAAATTCCAGTTCCAAACACAGATGATATTCAGAGCGAACCTCTGCCTAT
GGTAGAGAATAAACGCCCAAGTATTTGTGGGAATGATTTGTGTGAGTGAA
ATATGCCCTAAACATCTGACGTGGATATGAACACGCTAGTAAGGTATCAG
GTGGCAACCACTATGAACAGCATGTCTTCCTTCCCCCCTTTTTAGNTTCT
TGTTAGCTCTTTTACTTTTTTATTTAAATTTTTTTCAAACAAAATACTTC
ATGGTTCCTGGTGGCCCAATTCCTCCAAGACCTCCCCCACCTGCTACCCA
TT

Query= MSMg01no372_a06.b1 MSMg01no372_a06.b1 CHROMAT_FILE:
MSMg01no372_a06.b1 PHD_FILE: MSMg01no372_a06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:40 2005
         (549 letters)



>mm_chr8_116910374_116911322
          Length = 949

 Score =  961 bits (497), Expect = 0.0
 Identities = 536/549 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   gtggccagtctagcttaactggtgagttacaagccaatgagagaccctctctcaaaggag 60
           ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||
Sbjct: 201 gtggccagtctagcttaactggtgaattccaagccaatgagagaccctctctcaaaggag 260

                                                                       
Query: 61  gtagacagggttcctgactctaacacctgagactccctccaactgatgtatataacatat 120
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 261 gtagacagggttcctgactctaacacctgagacttcctccaactgatgtatataacatat 320

                                                                       
Query: 121 atgtgtacacgtgaagttcacatgtacacacacaacactatcaaaactaccatgacaata 180
           | |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 321 acgtgtacacgtgaagttcacatgtacatacacaacactatcaaaactaccatgacaata 380

                                                                       
Query: 181 gatgttattctagtctagttaaacagttggcccttcaagtcttggagctgaaggacatcc 240
           |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 381 gatgttattctagtctagttaaacagttggcccttcaagtcttggagctggaggacattc 440

                                                                       
Query: 241 tctttttcttaaaaacaaaaagaagacatttacaagtccaagaatgattttaaaagagaa 300
            |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 441 actttttcttaaaaacaaaaagaagacatttacaagttcaagaatgattttaaaagagaa 500

                                                                       
Query: 301 agcagcctcctggcttctttgtaagacttgaagcactaaacactataaatgcacaagcct 360
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 501 agcagcctcctggcttctttgtaagatttgaagcactaaacactataaatgcacaagcct 560

                                                                       
Query: 361 ggcactcgccccagagttctccagcaggcttgcagaaacttggatcctgcagctggaggc 420
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggcacttgccccagagttctccagcaggcttgcagaaacttggatcctgcagctggaggc 620

                                                                       
Query: 421 cagggcacccactcccgcttctcctggctgagatacttgccagtgcgtataactgaacac 480
           |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 caggacacccactcccccttctcctggctgagatacttgccagtgcgtataactgaacac 680

                                                                       
Query: 481 tcaactttcatctgtaagaaatccactctgctcgccactctgaagcccgtcttgcttttg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tcaactttcatctgtaagaaatccactctgctcgccactctgaagcccgtcttgcttttg 740

                    
Query: 541 ggtggtgac 549
           |||||||||
Sbjct: 741 ggtggtgac 749


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 549
Length of database: 949
Length adjustment: 10
Effective length of query: 539
Effective length of database: 939
Effective search space:   506121
Effective search space used:   506121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no372_a06.g1 MSMg01no372_a06.g1 CHROMAT_FILE:
MSMg01no372_a06.g1 PHD_FILE: MSMg01no372_a06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:10:41 2005
         (526 letters)



>mm_chr8_117095531_117096456
          Length = 926

 Score =  963 bits (498), Expect = 0.0
 Identities = 519/526 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   tttctgggactccttcctctctgaacgacatagtatgtgcacctattataaaaggaagat 60
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 726 tttctgggactccttcctctctgaacgacatagtatatgcacctattataaaaggaagat 667

                                                                       
Query: 61  gtccctacactggaatccaaggtgatgggtcaaggcagaactattgacaaaataaaaggt 120
           ||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 666 gtccctatactggaatccaaggtgatgggtcaaggcagagctattgacaaaataaaaggt 607

                                                                       
Query: 121 ggataggctacaattcaatcaaaacactatggatacattcgcacaggctctggaatgatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 ggataggctacaattcaatcaaaacactatggatacattcgcacaggctctggaatgatt 547

                                                                       
Query: 181 gacaggcctcttctgtttcctagtgattgttcatagataatgtactaagatttttccatt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 gacaggcctcttctgtttcctagtgattgttcatagataatgtactaagatttttccatt 487

                                                                       
Query: 241 tattttggaaggcacgatctgtcagatggacctctcatgacaatttaataaaatgcgtat 300
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 tattttggaaggcatgatctgtcagatggacctctcatgacaatttaataaaatgcgtat 427

                                                                       
Query: 301 actgtggtcactctgatcctcatggaactaaaatacaaatctgacagaaagaagtctcac 360
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 actgtggtcactttgatcctcatggaactaaaatacaaatctgacagaaagaagtctcac 367

                                                                       
Query: 361 cagcctcaagttaaagtgggcaaattccagttccaaacacagatgatattcagagcgaac 420
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 366 cagcctcaagttaaagtgggcaaatcccagttccaaacacagatgatattcagagcgaac 307

                                                                       
Query: 421 ctctgcctatggtagagaataaacgcccaagtatttgtgggaatgatttgtgtgagtgaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 ctctgcctatggtagagaataaacgcccaagtatttgtgggaatgatttgtgtgagtgaa 247

                                                         
Query: 481 atatgccctaaacatctgacgtggatatgaacacgctagtaaggta 526
           ||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 246 atatgccctaaacatctgacgtggatatgaacacgctggtaaggta 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 526
Length of database: 926
Length adjustment: 10
Effective length of query: 516
Effective length of database: 916
Effective search space:   472656
Effective search space used:   472656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)