Query= MSMg01no373_e04.b1 MSMg01no373_e04.b1 CHROMAT_FILE:
MSMg01no373_e04.b1 PHD_FILE: MSMg01no373_e04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:11 2005
(124 letters)
>mm_chr8_60735287_60735811
Length = 525
Score = 226 bits (117), Expect = 3e-64
Identities = 123/125 (98%), Gaps = 1/125 (0%)
Strand = Plus / Minus
Query: 1 atttgtttgagaaatttagggttttcttcggtgtctgtag-tttttttttaaagcattgg 59
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 325 atttgtttgagaaatttagggttttcttcggtgtctgtagttttttttttaaagcattgg 266
Query: 60 cagcaaaagcttcaaaaaaaatataactgaagcagaatgaagttttgtttgagaatatct 119
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cagcaaaagcttcaaaaagaatataactgaagcagaatgaagttttgtttgagaatatct 206
Query: 120 ttgca 124
|||||
Sbjct: 205 ttgca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 124
Length of database: 525
Length adjustment: 8
Effective length of query: 116
Effective length of database: 517
Effective search space: 59972
Effective search space used: 59972
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no373_e04.g1 MSMg01no373_e04.g1 CHROMAT_FILE:
MSMg01no373_e04.g1 PHD_FILE: MSMg01no373_e04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:11 2005
(519 letters)
>mm_chr8_60557340_60558257
Length = 918
Score = 948 bits (490), Expect = 0.0
Identities = 511/518 (98%), Gaps = 1/518 (0%)
Strand = Plus / Plus
Query: 2 ttttctcaactgtcaatcaatagaatctgattttcaaaagaaagttacagaacagggata 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 202 ttttctcaactgtcaatcaatagaatctgattttcaaaagaaagttacagaacaggggta 261
Query: 62 tgactgtttcaaagactcccagagccttgatgaacaagactgtttactcttgtaagaaca 121
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 262 tgactgtttcaaagactcccagagccttgatgaacaagactgtttactcttgcaagaaca 321
Query: 122 aagaacaaaccacacgaagtttcattatttattaggcattaacaattgattgatcctgct 181
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 aagaacaaaccacatgaagtttcattatttattaggcattaacaattgattgatcctgct 381
Query: 182 cagttatctgccattaccctccatgatctatatttggagatgcttcttttcagagccggg 241
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 382 cagttatctgccattaccctccatgatctatatttggtgatgcttcttttcagagccggg 441
Query: 242 gaaaaggacatccaagggtcctttcactcagaggtgataagccacaaagattggagtgag 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 gaaaaggacatccaagggtcctttcactcagaggtgataagccacaaagattggagtgag 501
Query: 302 ttgagagctcctgtcaataacatagagtctgttctgtatgaacatgcttgaggtcacttt 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ttgagagctcctgtcaataacatagagtctgttctgtatgaacatgcttgaggtcacttt 561
Query: 362 cattctgttttgactgctgtaaaaaaaggactagccatgctgattacaattttgcaaaaa 421
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 562 cattctgttttgactgctgtaaaaaaag-actagccatgctgattacaattttgcaaaaa 620
Query: 422 acaaacttaatcattgcaaagaaatcccacatcaatggattacattattgcaacccttgt 481
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 621 acaaacttaatcattgcaaagaaatcccacatcaatggattacattattgcaatccttgt 680
Query: 482 gttcacagggaaacatgcatctaaatacacattagtca 519
||||||||||||||||| ||||||||||||||||||||
Sbjct: 681 gttcacagggaaacatgtatctaaatacacattagtca 718
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 918
Length adjustment: 10
Effective length of query: 509
Effective length of database: 908
Effective search space: 462172
Effective search space used: 462172
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
