Query= MSMg01no373_l23.b1 MSMg01no373_l23.b1 CHROMAT_FILE:
MSMg01no373_l23.b1 PHD_FILE: MSMg01no373_l23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:46 2005
(467 letters)
>mm_chr17_36368353_36369219
Length = 867
Score = 466 bits (241), Expect = e-135
Identities = 322/363 (88%), Gaps = 25/363 (6%)
Strand = Plus / Minus
Query: 107 tgtttttgtgggtttaccctttaaataagcaatacatcttcc-ggactggccaactctct 165
||||||||||||||| ||||||||||||||||| | ||||| | |||||||||||| ||
Sbjct: 820 tgtttttgtgggtttgccctttaaataagcaatgtagcttcctgaactggccaactccct 761
Query: 166 gagcacacagaaaataaagctttcatttttaagcttgaattggctttt-tccacctccac 224
|||||||||||||||||||||||| |||||||| ||||| |||||||||||
Sbjct: 760 ---------gaaaataaagctttcatttttaagtttgaattgacttttctccacctccac 710
Query: 225 tcagaacccaacaacaattcatagaaggaacaaagttccctaagcactgcctttggagct 284
||||||||||||| || ||||||||| ||||||||||||||| ||||
Sbjct: 709 tcagaacccaacagcacttcatagaaagaacaaagttcccta--------------agct 664
Query: 285 ttttgccctctgtggatgtactgtaagcagctgctccagcttcccaactccatggccatg 344
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 ttttgccccctgtggatgtactgtaagcagctgctccagcttcccaactccatggccatg 604
Query: 345 ccctgggtctgtgcccaactacacacttcctcccttgctcatgtctgaggattttgtcat 404
||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 603 ccctgggtctgtgcccaactacacacttcctcccttgcttatgtcagaggattttgtcat 544
Query: 405 accacaggaaaataaaccaagaccaatgcatgcatgccatagaattaaagattatgaaga 464
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 543 accacaggaaaataaaccaagaccaacgcatgcatgccatagaattaaagattatggaga 484
Query: 465 gtc 467
|||
Sbjct: 483 gtc 481
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 867
Length adjustment: 10
Effective length of query: 457
Effective length of database: 857
Effective search space: 391649
Effective search space used: 391649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no373_l23.g1 MSMg01no373_l23.g1 CHROMAT_FILE:
MSMg01no373_l23.g1 PHD_FILE: MSMg01no373_l23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:12:46 2005
(454 letters)
>mm_chr8_119552017_119552870
Length = 854
Score = 474 bits (245), Expect = e-138
Identities = 308/329 (93%), Gaps = 2/329 (0%)
Strand = Plus / Minus
Query: 1 agtggttgtggatcgtgcctgggataggggacaaaactgtaattgaaccgtggatcacac 60
|||||||| |||||||||||||| |||||||| |||||||| ||||||||||||||||||
Sbjct: 528 agtggttgcggatcgtgcctggggtaggggacgaaactgtagttgaaccgtggatcacac 469
Query: 61 agctcagggcctatgtgtgctcttgacctctgtgccatgtgcccttgcctgtggctcatg 120
| ||||||| |||||| ||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 468 aactcagggtctatgtatgctcttgacctctgtgccgtgcgcccttgcctgtggctcatg 409
Query: 121 tcccctcgccct-gttgggctttcttgcagggtatacagagtcttatcagctcactgttt 179
|||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 408 tcccctcg-cctcgttgggctttcttgcagggtatacagagtctcatcagctcactgttt 350
Query: 180 aaagccctgaaagtgccacgcccagcctcagactgggactctatgaacccggtggacatt 239
||||||||||| |||| || ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 349 aaagccctgaaggtgcaacccccagcctcaggctgggactctatgaacccggtggacatt 290
Query: 240 aactacctcctcgctttaatggaggacatcatctgtcctgagagcacagaaggaccgggg 299
|||||||||||| ||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 289 aactacctcctcactttaatggaggacatcatctgtccggagagcacagagggaccgggg 230
Query: 300 ttctaggaggaagccaaaggcagagagga 328
|||| ||||||||||||||| ||||||||
Sbjct: 229 ttctgggaggaagccaaagggagagagga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 454
Length of database: 854
Length adjustment: 10
Effective length of query: 444
Effective length of database: 844
Effective search space: 374736
Effective search space used: 374736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
