Query= MSMg01no376_o05.b1 MSMg01no376_o05.b1 CHROMAT_FILE:
MSMg01no376_o05.b1 PHD_FILE: MSMg01no376_o05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:53 2005
(601 letters)
>mm_chr8_130783495_130784495
Length = 1001
Score = 1094 bits (566), Expect = 0.0
Identities = 589/597 (98%)
Strand = Plus / Plus
Query: 5 gaattctgggaatcaaactcacatctttgttcttgttaggcaaggaatttcccaatagaa 64
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 205 gaattctgggaatcaaactcacatctttgttcttgtaaggcaaggaatttcccaatagaa 264
Query: 65 acatttcctcagccctgaaaaaattaaacatatttttcttatatgaaaatcatgcaccat 124
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 265 acatttcctcagccctgaaaaatttaaacatatttttcttatatgaaaatcatgcaccat 324
Query: 125 gcaatcaagaagggtttgtgagaatgtgtttacacacaactccttgttgtatcaaggccg 184
|||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 325 acaatcaagaagggtttgtgagaatatatttacacacaactccttgttgtatcaaggccg 384
Query: 185 ctatcttgtcatattgcctacatgacaaagcatggcctttgggtctctacaaccagatta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctatcttgtcatattgcctacatgacaaagcatggcctttgggtctctacaaccagatta 444
Query: 245 catctcaatggcacatcacttgctgctgtcacagatccaccatgttggagagaagccaag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 catctcaatggcacatcacttgctgctgtcacagatccaccatgttggagagaagccaag 504
Query: 305 gtgtgcagacatcattagttatttttttttccaggtagaataaaattgacctccttggaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gtgtgcagacatcattagttatttttttttccaggtagaataaaattgacctccttggaa 564
Query: 365 gtagagcacagaacttgaggatcccaagaagctggctagcgtgttagagcaatggggtga 424
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 565 gtagagcacagaacttgaggatcccaagaagctggctagtgtgttagagcaatggggtga 624
Query: 425 tgcaaagcccccatttgctgtttccataggactcaatttgagtggcagctatgaaggact 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tgcaaagcccccatttgctgtttccataggactcaatttgagtggcagctatgaaggact 684
Query: 485 gtgagattcacctgggtgtcctccaacttaagtactatgcaaatacagtggaaaaaaaca 544
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 685 gtgagattcacctgggtgtcctctaacttaagtactatgcaaatacagtggaaaaaaaca 744
Query: 545 catctgcttcatgacctcnactgacactcagggatgctgctgctaatggagctgggt 601
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 745 catctgcttcatgacctcaactgacactcagggatgctgctgctaatggagctgggt 801
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 601
Length of database: 1001
Length adjustment: 10
Effective length of query: 591
Effective length of database: 991
Effective search space: 585681
Effective search space used: 585681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no376_o05.g1 MSMg01no376_o05.g1 CHROMAT_FILE:
MSMg01no376_o05.g1 PHD_FILE: MSMg01no376_o05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:53 2005
(488 letters)
>mm_chr8_130797219_130798105
Length = 887
Score = 928 bits (480), Expect = 0.0
Identities = 486/488 (99%), Gaps = 1/488 (0%)
Strand = Plus / Minus
Query: 1 tgaggataaacataggaactcaagctcttgatggatttggttcatgactgctatgttttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 tgaggataaacataggaactcaagctcttgatggatttggttcatgactgctatgttttc 628
Query: 61 ctaccacaaagtcataatcagataattgaaaaacaaaaaagtcttaaatacatttctatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 ctaccacaaagtcataatcagataattgaaaaacaaaaaagtcttaaatacatttctatt 568
Query: 121 acccagtatgctatttttcaagtagcaaatagtgagtctatcagtccagcccagagtgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 acccagtatgctatttttcaagtagcaaatagtgagtctatcagtccagcccagagtgat 508
Query: 181 agtttagataaaagagaaatgctgtttctaaactctggtcataactctgagatcttatac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 agtttagataaaagagaaatgctgtttctaaactctggtcataactctgagatcttatac 448
Query: 241 ttctctgtgtttcccttcctgtgaatcgaggaggaacatgggccaagctttgatgggtat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ttctctgtgtttcccttcctgtgaatcgaggaggaacatgggccaagctttgatgggtat 388
Query: 301 tctccacagaaaagaacaagataaagagctcagtgttagcatcttcagtgctatgtgtga 360
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 387 tctccacagaaaagaacaagataaagagctcagtgttagcatcctcagtgctatgtgtga 328
Query: 361 agtgggggtggaggttacagaggagccacagaggtagtttgggccttgggaagaaagttc 420
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 agtgggg-tggaggttacagaggagccacagaggtagtttgggccttgggaagaaagttc 269
Query: 421 tggaagagtgcagataaaaatcttcatggggtttgcacagaacatgatgggggatgctac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 tggaagagtgcagataaaaatcttcatggggtttgcacagaacatgatgggggatgctac 209
Query: 481 tggtaagg 488
||||||||
Sbjct: 208 tggtaagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 488
Length of database: 887
Length adjustment: 10
Effective length of query: 478
Effective length of database: 877
Effective search space: 419206
Effective search space used: 419206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
