Query= MSMg01no376_o19.b1 MSMg01no376_o19.b1 CHROMAT_FILE:
MSMg01no376_o19.b1 PHD_FILE: MSMg01no376_o19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:56 2005
(467 letters)
>mm_chr8_16569697_16570557
Length = 861
Score = 832 bits (430), Expect = 0.0
Identities = 453/464 (97%), Gaps = 6/464 (1%)
Strand = Plus / Plus
Query: 4 ggaattcacattccattcacattgagatgagtctgaaaattcctcccgattctgctctgt 63
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcacattccagtcacattgagatgagtctgaaaattcctcccgattctgctctgt 263
Query: 64 tttgtgtttgttcatatataataattattttaaagcacatagtcttacgatgaatagaca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tttgtgtttgttcatatataataattattttaaagcacatagtcttacgatgaatagaca 323
Query: 124 tgcacatgcacaccagtaaaaatgctaattggggtaaaataactaggcgctattaaggac 183
|||||| ||||||||||||||||||||||||||||| ||||||||||||||| ||
Sbjct: 324 tgcaca------ccagtaaaaatgctaattggggtaaaatagctaggcgctattaagcac 377
Query: 184 tcctttcatgcatgcctaatcgaaatttccaaattgtttccactgtggagaagttcactg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tcctttcatgcatgcctaatcgaaatttccaaattgtttccactgtggagaagttcactg 437
Query: 244 tattaaggaaacccacttcctgcctctctatctctaaagtttttgtactctgagttcttt 303
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 438 tattaaggaaacccacttcctgcctctccatctctaaagtttttgtactctgagttcttt 497
Query: 304 ctcagagatagtctatatcaacacactccacactgggcactactgccctctctaagcatt 363
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 ctcagagatagtatatatcaacacactccacactgggcactactgccctctctaagcatt 557
Query: 364 tcttcccgctggctctgaaggcagtgtggtatatggtcgggacctaaattttccatgcat 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 tcttcccgctggctctgaaggcagtgtggtatatggtcgggacctaaattttccatgcat 617
Query: 424 taagaaagtcaccagctcctgagcctagagactgatcaggatca 467
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 taagaaagtcaccagctcctgagcctagagactgatcaggatca 661
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 861
Length adjustment: 10
Effective length of query: 457
Effective length of database: 851
Effective search space: 388907
Effective search space used: 388907
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no376_o19.g1 MSMg01no376_o19.g1 CHROMAT_FILE:
MSMg01no376_o19.g1 PHD_FILE: MSMg01no376_o19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:56 2005
(414 letters)
>mm_chr8_16641678_16642491
Length = 814
Score = 785 bits (406), Expect = 0.0
Identities = 412/414 (99%)
Strand = Plus / Minus
Query: 1 catgggtgcttatggttccttagaccatcagtgaggtgggtttctggtgatagattccat 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 614 catgggtgcttatggttccttagaccatcaatgaggtgggtttctggtgatagattccat 555
Query: 61 tggatcagaggcagactgtaaacagggaaaccagttggaactgaattcctttggtggcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 tggatcagaggcagactgtaaacagggaaaccagttggaactgaattcctttggtggcat 495
Query: 121 ttacagtgatagagactccattaaacataagaaaggaccttaagacggatgtgattgaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 ttacagtgatagagactccattaaacataagaaaggaccttaagacggatgtgattgaat 435
Query: 181 tctggaataagctttcaagagagtgtgacatagaggcccccgagatctccctggatgcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 tctggaataagctttcaagagagtgtgacatagaggcccccgagatctccctggatgcag 375
Query: 241 actgtggcaagatgaaatattctcagagccctgagagaccagtaaacaacagttgccaag 300
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 accgtggcaagatgaaatattctcagagccctgagagaccagtaaacaacagttgccaag 315
Query: 301 acaatttgacaatgtgccctggccatcttgaaattctagaacactggaatgtccctgaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 acaatttgacaatgtgccctggccatcttgaaattctagaacactggaatgtccctgaag 255
Query: 361 ggcttactgggcagccttgaataagcaggacttggcagggactgtttgaaatag 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 ggcttactgggcagccttgaataagcaggacttggcagggactgtttgaaatag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 414
Length of database: 814
Length adjustment: 9
Effective length of query: 405
Effective length of database: 805
Effective search space: 326025
Effective search space used: 326025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
