Query= MSMg01no377_m14.b1 MSMg01no377_m14.b1 CHROMAT_FILE:
MSMg01no377_m14.b1 PHD_FILE: MSMg01no377_m14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:06 2005
(315 letters)
>mm_chr8_14011603_14012317
Length = 715
Score = 565 bits (292), Expect = e-165
Identities = 307/312 (98%)
Strand = Plus / Plus
Query: 4 ggaattccaacctttacgctggaggggttggacctggagagaagctggtggacaaagcaa 63
|||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccaaccaataggctggaggggttggacctggagagaagctggtggacaaagcaa 263
Query: 64 ccatttgatacaatgagctgatgtcttgctacattttcttagactgttctctcacagtga 123
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 264 ccatttgatacaatgagctgatgtcttgctacattttcttaggctgttctctcacagtga 323
Query: 124 gctgttggcacacagatagtgggtagttgttgcactggctagatatgaccctggcaacag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gctgttggcacacagatagtgggtagttgttgcactggctagatatgaccctggcaacag 383
Query: 184 ttatctcctgcttaaggagagtggaggccactgcagatgaatatctgagctgcaagaacc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ttatctcctgcttaaggagagtggaggccactgcagatgaatatctgagctgcaagaacc 443
Query: 244 aaaacttggctgggcggtggtggtgcatgtctttaatcccagcacttgaggtggaggtga 303
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 444 aaaacttggctgggcggtggtggtgcatgcctttaatcccagcacttgaggtggaggtga 503
Query: 304 agggggtaagaa 315
||||||||||||
Sbjct: 504 agggggtaagaa 515
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no377_m14.g1 MSMg01no377_m14.g1 CHROMAT_FILE:
MSMg01no377_m14.g1 PHD_FILE: MSMg01no377_m14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:06 2005
(400 letters)
>mm_chr8_14154349_14155149
Length = 801
Score = 745 bits (385), Expect = 0.0
Identities = 397/401 (99%), Gaps = 1/401 (0%)
Strand = Plus / Minus
Query: 1 actgactgggtatcaactgtcacataagaaagggaacaactgatacatacaagaatctca 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 actgactgggtatcaaccgtcacataagaaagggaacaactgatacatacaagaatctca 542
Query: 61 agaaacttcaaaaacgttgcattggatttaagaaaactcaaaaatatacttagtgtaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 agaaacttcaaaaacgttgcattggatttaagaaaactcaaaaatatacttagtgtaaga 482
Query: 121 aac-tttttttttcaagaaatagtcaagactggttgacagtgcccaatacagtttgtatc 179
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aacttttttttttcaagaaatagtcaagactggttgacagtgcccaatacagtttgtatc 422
Query: 180 tttagagtcttcaaaggcttatgtgttgtccacctgggtctgggtgtacctttgtaagtg 239
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 421 tttagagtcttcaaaggcttatgtaatgtccacctgggtctgggtgtacctttgtaagtg 362
Query: 240 actagatcctggggactctcactatgtggatggactgatccactgaggggttcatggctt 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 actagatcctggggactctcactatgtggatggactgatccactgaggggttcatggctt 302
Query: 300 agtgggatgtcaggggtttaatcaagcaagctctggccccttggagtaaggtgctctgat 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 agtgggatgtcaggggtttaatcaagcaagctctggccccttggagtaaggtgctctgat 242
Query: 360 ttactgcctgctcccccacaaaacacactgccctgttgcaa 400
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttactgcctgctcccccacaaaacacactgccctgttgcaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 400
Length of database: 801
Length adjustment: 9
Effective length of query: 391
Effective length of database: 792
Effective search space: 309672
Effective search space used: 309672
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
